NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_051566.1 RefSeqGene
- Range
-
5047..124096
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001301015.3 → NP_001287944.1 actin-binding LIM protein 3 isoform 1
See identical proteins and their annotated locations for NP_001287944.1
Status: REVIEWED
- Source sequence(s)
-
AC012613, AC091940
- Consensus CDS
-
CCDS4294.1
- UniProtKB/Swiss-Prot
- A8K121, O94929, Q19VH3, Q658S1, Q68CI5, Q9BV32
- Related
- ENSP00000425394.1, ENST00000506113.5
- Conserved Domains (6) summary
-
- smart00153
Location:648 → 683
- VHP; Villin headpiece domain
- cd09327
Location:23 → 74
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:79 → 134
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:151 → 202
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:210 → 265
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:274 → 647
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
NM_001301018.3 → NP_001287947.1 actin-binding LIM protein 3 isoform 2
See identical proteins and their annotated locations for NP_001287947.1
Status: REVIEWED
- Source sequence(s)
-
AB020650, AC012613, AC091940, AK225769, DA669720, DQ413174
- Consensus CDS
-
CCDS78069.1
- UniProtKB/TrEMBL
-
A0A0C4DGA7
- Conserved Domains (6) summary
-
- smart00153
Location:615 → 650
- VHP; Villin headpiece domain
- cd09327
Location:23 → 74
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:79 → 134
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:151 → 202
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:210 → 265
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:274 → 614
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
NM_001301028.3 → NP_001287957.1 actin-binding LIM protein 3 isoform 4
See identical proteins and their annotated locations for NP_001287957.1
Status: REVIEWED
- Source sequence(s)
-
AC012613, AC091940
- Consensus CDS
-
CCDS78071.1
- UniProtKB/Swiss-Prot
-
O94929
- Related
- ENSP00000421183.1, ENST00000504238.5
- Conserved Domains (5) summary
-
- cd09327
Location:23 → 74
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:79 → 134
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:151 → 202
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:210 → 265
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:274 → 535
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
NM_001345858.2 → NP_001332787.1 actin-binding LIM protein 3 isoform 5
Status: REVIEWED
- Source sequence(s)
-
AC012613, AC091940, AL833021
- UniProtKB/Swiss-Prot
-
O94929
- Conserved Domains (6) summary
-
- smart00153
Location:599 → 634
- VHP; Villin headpiece domain
- cd09327
Location:23 → 74
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:79 → 134
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:151 → 202
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:210 → 265
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:274 → 598
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
NM_001345859.2 → NP_001332788.1 actin-binding LIM protein 3 isoform 6
Status: REVIEWED
- Source sequence(s)
-
AC012613, AC091940, AL833021
- Consensus CDS
-
CCDS87335.1
- UniProtKB/Swiss-Prot
-
O94929
- Related
- ENSP00000315841.7, ENST00000326685.11
- Conserved Domains (6) summary
-
- smart00153
Location:553 → 588
- VHP; Villin headpiece domain
- cd09327
Location:23 → 74
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:79 → 134
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:151 → 202
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:210 → 265
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:273 → 552
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
NM_001345860.2 → NP_001332789.1 actin-binding LIM protein 3 isoform 7
Status: REVIEWED
- Source sequence(s)
-
AC012613, AC091940, AL833021
- UniProtKB/Swiss-Prot
-
O94929
- Conserved Domains (6) summary
-
- smart00153
Location:537 → 572
- VHP; Villin headpiece domain
- cd09327
Location:23 → 74
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:79 → 134
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:151 → 202
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:210 → 265
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:273 → 536
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
NM_001345861.2 → NP_001332790.1 actin-binding LIM protein 3 isoform 6
Status: REVIEWED
- Source sequence(s)
-
AC012613, AC091940
- Consensus CDS
-
CCDS87335.1
- UniProtKB/Swiss-Prot
-
O94929
- Conserved Domains (6) summary
-
- smart00153
Location:553 → 588
- VHP; Villin headpiece domain
- cd09327
Location:23 → 74
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:79 → 134
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:151 → 202
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:210 → 265
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:273 → 552
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
NM_001370417.1 → NP_001357346.1 actin-binding LIM protein 3 isoform 2
Status: REVIEWED
- Source sequence(s)
-
AC012613, AC091940
- Consensus CDS
-
CCDS78069.1
- UniProtKB/TrEMBL
-
A0A0C4DGA7
- Related
- ENSP00000420855.1, ENST00000508983.5
- Conserved Domains (6) summary
-
- smart00153
Location:615 → 650
- VHP; Villin headpiece domain
- cd09327
Location:23 → 74
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:79 → 134
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:151 → 202
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:210 → 265
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:274 → 614
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
NM_001370418.1 → NP_001357347.1 actin-binding LIM protein 3 isoform 7
Status: REVIEWED
- Source sequence(s)
-
AC012613, AC091940
- Conserved Domains (6) summary
-
- smart00153
Location:537 → 572
- VHP; Villin headpiece domain
- cd09327
Location:23 → 74
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:79 → 134
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:151 → 202
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:210 → 265
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:273 → 536
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
NM_014945.5 → NP_055760.1 actin-binding LIM protein 3 isoform 1
See identical proteins and their annotated locations for NP_055760.1
Status: REVIEWED
- Source sequence(s)
-
AC012613, AK225769, AK289736, BC001665, BP285049
- Consensus CDS
-
CCDS4294.1
- UniProtKB/Swiss-Prot
- A8K121, O94929, Q19VH3, Q658S1, Q68CI5, Q9BV32
- Related
- ENSP00000310309.7, ENST00000309868.12
- Conserved Domains (6) summary
-
- smart00153
Location:648 → 683
- VHP; Villin headpiece domain
- cd09327
Location:23 → 74
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:79 → 134
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:151 → 202
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:210 → 265
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:274 → 647
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
- Range
-
149141493..149260542
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005268394.3 → XP_005268451.1 actin-binding LIM protein 3 isoform X2
See identical proteins and their annotated locations for XP_005268451.1
- Conserved Domains (6) summary
-
- smart00153
Location:586 → 621
- VHP; Villin headpiece domain
- cd09327
Location:23 → 74
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:79 → 134
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:151 → 202
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:210 → 265
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:273 → 585
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
XM_011537609.4 → XP_011535911.1 actin-binding LIM protein 3 isoform X4
- Conserved Domains (5) summary
-
- cd09327
Location:23 → 74
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:79 → 134
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:151 → 202
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:210 → 265
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:274 → 435
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
XM_024446006.2 → XP_024301774.1 actin-binding LIM protein 3 isoform X3
- Conserved Domains (5) summary
-
- cd09327
Location:23 → 74
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:79 → 134
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:151 → 202
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:210 → 265
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:274 → 351
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
XM_024446004.2 → XP_024301772.1 actin-binding LIM protein 3 isoform X1
- Conserved Domains (6) summary
-
- smart00153
Location:599 → 634
- VHP; Villin headpiece domain
- cd09327
Location:23 → 74
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:79 → 134
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:151 → 202
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:210 → 265
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:274 → 598
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
Alternate T2T-CHM13v2.0
Genomic
-
NC_060929.1 Alternate T2T-CHM13v2.0
- Range
-
149676400..149795360
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054352094.1 → XP_054208069.1 actin-binding LIM protein 3 isoform X2
-
XM_054352096.1 → XP_054208071.1 actin-binding LIM protein 3 isoform X4
-
XM_054352095.1 → XP_054208070.1 actin-binding LIM protein 3 isoform X3
-
XM_054352093.1 → XP_054208068.1 actin-binding LIM protein 3 isoform X1
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001301027.2: Suppressed sequence
- Description
- NM_001301027.2: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.