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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001018016.3 → NP_001018016.1  mucin-1 isoform 2 precursor
See identical proteins and their annotated locations for NP_001018016.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses alternate in-frame splice sites for two exons, compared to variant 1. The resulting isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AA425062, BC120975, J05581
- Consensus CDS
-
CCDS30882.1
- UniProtKB/TrEMBL
-
A5YRU8
- Related
- ENSP00000357377.3, ENST00000368392.7
- Conserved Domains (1) summary
-
- smart00200
Location:45 → 161
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
-
NM_001018017.3 → NP_001018017.1  mucin-1 isoform 3 precursor
See identical proteins and their annotated locations for NP_001018017.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate in-frame splice site, compared to variant 1. The resulting isoform (3) is shorter than isoform 1.
- Source sequence(s)
-
AA425062, AC234582, BC120974, J05581
- Consensus CDS
-
CCDS30883.1
- UniProtKB/TrEMBL
-
A5YRU8
- Related
- ENSP00000357375.3, ENST00000368390.7
- Conserved Domains (1) summary
-
- smart00200
Location:36 → 152
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
-
NM_001044390.3 → NP_001037855.1  mucin-1 isoform 5 precursor
See identical proteins and their annotated locations for NP_001037855.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) has multiple differences which result in a frameshift in the central coding region, compared to variant 1. These differences result in a shorter isoform (5), compared to isoform 1.
- Source sequence(s)
-
AA425062, AC234582, AY327582, J05581
- Consensus CDS
-
CCDS41409.1
- UniProtKB/Swiss-Prot
-
P15941
- Related
- ENSP00000339690.5, ENST00000343256.9
-
NM_001044391.3 → NP_001037856.1  mucin-1 isoform 6 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) has multiple differences but maintains the reading frame, compared to variant 1. These differences result in a shorter isoform (6), compared to isoform 1.
- Source sequence(s)
-
AA425062, AC234582, AY327583, J05581
- UniProtKB/TrEMBL
-
Q7Z551
- Conserved Domains (2) summary
-
- cl00944
Location:110 → 145
- KdpC; K+-transporting ATPase, c chain
- cl02507
Location:36 → 76
- SEA; SEA domain
-
NM_001044392.3 → NP_001037857.1  mucin-1 isoform 7 precursor
See identical proteins and their annotated locations for NP_001037857.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) has multiple differences but maintains the reading frame, compared to variant 1. These differences result in a shorter isoform (7), compared to isoform 1.
- Source sequence(s)
-
AA425062, AC234582, AY327584, J05581
- Consensus CDS
-
CCDS41408.1
- UniProtKB/TrEMBL
- A0A384NPK6, A6ZIE7
- Related
- ENSP00000357381.4, ENST00000368396.8
- Conserved Domains (1) summary
-
- cl02507
Location:45 → 85
- SEA; SEA domain
-
NM_001044393.3 → NP_001037858.1  mucin-1 isoform 8 precursor
See identical proteins and their annotated locations for NP_001037858.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) lacks an exon in the coding region, which results in a frameshift and an early stop codon, compared to variant 1. The encoded isoform (8) is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AA425062, AC234582, AY327598, J05581
- UniProtKB/TrEMBL
-
Q7Z538
- Related
- ENSP00000484730.1, ENST00000471283.5
-
NM_001204285.2 → NP_001191214.1  mucin-1 isoform 9 precursor
See identical proteins and their annotated locations for NP_001191214.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) has multiple differences but maintains the reading frame, compared to variant 1. The encoded isoform (9) is longer than isoform 1.
- Source sequence(s)
-
AA425062, AC234582, J05581
- Consensus CDS
-
CCDS55640.2
- UniProtKB/TrEMBL
- A0A0C4DGW3, B4DWK6
- Related
- ENSP00000481231.1, ENST00000620103.4
- Conserved Domains (1) summary
-
- smart00200
Location:254 → 372
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
-
NM_001204286.1 → NP_001191215.1  mucin-1 isoform 10 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (10) has multiple differences but maintains the reading frame, compared to variant 1. The encoded isoform (10) is longer than isoform 1.
- Source sequence(s)
-
AA425062, AC234582, AH001451, J05581
- UniProtKB/TrEMBL
-
B4DWK6
- Conserved Domains (1) summary
-
- smart00200
Location:263 → 381
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
-
NM_001204287.2 → NP_001191216.1  mucin-1 isoform 11 precursor
See identical proteins and their annotated locations for NP_001191216.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (11) uses an alternate splice site, compared to variant 1. The encoded isoform (11) is longer than isoform 1.
- Source sequence(s)
-
AA425062, EF583647, J05581
- UniProtKB/TrEMBL
- A5YRU5, A6ZID5
- Related
- ENSP00000388172.3, ENST00000457295.6
- Conserved Domains (1) summary
-
- smart00200
Location:64 → 179
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
-
NM_001204288.2 → NP_001191217.1  mucin-1 isoform 12 precursor
See identical proteins and their annotated locations for NP_001191217.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (12) has multiple differences, one of which results in a frameshift and an early stop codon, compared to variant 1. The encoded isoform (12) is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AA425062, EF583649, J05581
- UniProtKB/TrEMBL
- A5YRU7, B6ECB2
- Conserved Domains (1) summary
-
- smart00200
Location:45 → 150
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
-
NM_001204289.2 → NP_001191218.1  mucin-1 isoform 13 precursor
See identical proteins and their annotated locations for NP_001191218.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (13) has multiple differences but maintains the reading frame, compared to variant 1. The encoded isoform (13) is shorter than isoform 1.
- Source sequence(s)
-
AA425062, AC234582, EF583652, J05581
- UniProtKB/TrEMBL
- A5YRV0, A6ZID6
- Related
- ENSP00000389098.1, ENST00000438413.5
- Conserved Domains (1) summary
-
- cl02507
Location:63 → 135
- SEA; SEA domain
-
NM_001204290.2 → NP_001191219.1  mucin-1 isoform 14 precursor
See identical proteins and their annotated locations for NP_001191219.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (14) has multiple differences but maintains the reading frame, compared to variant 1. The encoded isoform (14) is shorter than isoform 1.
- Source sequence(s)
-
AA425062, EF583654, J05581
- UniProtKB/TrEMBL
- A5YRV2, B1AVQ7
- Conserved Domains (1) summary
-
- cl02507
Location:42 → 114
- SEA; SEA domain
-
NM_001204291.1 → NP_001191220.1  mucin-1 isoform 15 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (15) has multiple differences but maintains the reading frame, compared to variant 1. The encoded isoform (15) is shorter than isoform 1.
- Source sequence(s)
-
AA425062, AC234582, EF670708, J05581
- Consensus CDS
-
CCDS72934.1
- UniProtKB/TrEMBL
- A0A0A0MRB3, A6ZID6
- Related
- ENSP00000343482.6, ENST00000338684.9
- Conserved Domains (1) summary
-
- smart00200
Location:62 → 138
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
-
NM_001204292.1 → NP_001191221.1  mucin-1 isoform 16 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (16) has multiple differences compared to variant 1, one of which results in a translational frameshift in the central coding region. The encoded isoform (16) is shorter than isoform 1.
- Source sequence(s)
-
AA425062, AC234582, EF670709, J05581
- Consensus CDS
-
CCDS72935.1
- UniProtKB/TrEMBL
- A0A087X0L2, A6ZID7
- Related
- ENSP00000483482.1, ENST00000610359.4
- Conserved Domains (1) summary
-
- cl02507
Location:80 → 136
- SEA; SEA domain
-
NM_001204293.2 → NP_001191222.1  mucin-1 isoform 17 precursor
See identical proteins and their annotated locations for NP_001191222.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (17) lacks an exon in the 3' coding region, which results in a frameshift and an early stop codon, compared to variant 1. The encoded isoform (17) is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AA425062, AC234582, EF670711, J05581
- Consensus CDS
-
CCDS55642.1
- UniProtKB/TrEMBL
-
B6ECB2
- Related
- ENSP00000357378.3, ENST00000368393.7
- Conserved Domains (1) summary
-
- smart00200
Location:55 → 158
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
-
NM_001204294.2 → NP_001191223.1  mucin-1 isoform 18 precursor
See identical proteins and their annotated locations for NP_001191223.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (18) has multiple differences compared to variant 1, one of which results in a translational frameshift in the central coding region. The encoded isoform (18) is shorter than isoform 1.
- Source sequence(s)
-
AA425062, AC234582, EF670712, J05581
- Consensus CDS
-
CCDS55641.1
- UniProtKB/TrEMBL
-
A6ZID7
- Related
- ENSP00000357383.3, ENST00000368398.7
- Conserved Domains (1) summary
-
- cl02507
Location:71 → 127
- SEA; SEA domain
-
NM_001204295.1 → NP_001191224.1  mucin-1 isoform 19 precursor
See identical proteins and their annotated locations for NP_001191224.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (19) has multiple differences but maintains the reading frame, compared to variant 1. These differences result in a shorter isoform (19), compared to isoform 1.
- Source sequence(s)
-
AA425062, AC234582, EF670716, J05581
- Consensus CDS
-
CCDS72936.1
- UniProtKB/TrEMBL
- A6ZIE4, Q7Z549
- Related
- ENSP00000483473.1, ENST00000615517.4
- Conserved Domains (1) summary
-
- cl02507
Location:45 → 85
- SEA; SEA domain
-
NM_001204296.2 → NP_001191225.1  mucin-1 isoform 20 precursor
See identical proteins and their annotated locations for NP_001191225.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (20) has multiple differences compared to variant 1, one of which results in a translational frameshift in the central coding region. The encoded isoform (20) is shorter than isoform 1.
- Source sequence(s)
-
AA425062, FJ226053, J05581
- UniProtKB/TrEMBL
-
B6ECB3
-
NM_001204297.2 → NP_001191226.1  mucin-1 isoform 21 precursor
See identical proteins and their annotated locations for NP_001191226.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (21) has multiple differences but maintains the reading frame, compared to variant 1. These differences result in a shorter isoform (21), compared to isoform 1.
- Source sequence(s)
-
AA425062, EF670718, J05581
- UniProtKB/TrEMBL
- A6ZIE6, A6ZIE7
- Related
- ENSP00000357374.2, ENST00000368389.6
- Conserved Domains (2) summary
-
- cl00944
Location:137 → 172
- KdpC; K+-transporting ATPase, c chain
- cl02507
Location:64 → 103
- SEA; SEA domain
-
NM_001371720.2 → NP_001358649.2  mucin-1 isoform 22 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (22) has multiple differences but maintains the reading frame, compared to variant 1. The encoded isoform (22) is longer than isoform 1.
- Source sequence(s)
-
CP068277
-
NM_002456.6 → NP_002447.4  mucin-1 isoform 1 precursor
See identical proteins and their annotated locations for NP_002447.4
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents isoform 1.
- Source sequence(s)
-
AA425062, AC234582, J05581, U60261
- Consensus CDS
-
CCDS1098.1
- UniProtKB/TrEMBL
-
A6ZID5
- Related
- ENSP00000338983.5, ENST00000337604.6
- Conserved Domains (1) summary
-
- smart00200
Location:55 → 170
- SEA; Domain found in sea urchin sperm protein, enterokinase, agrin
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11Â Reference GRCh38.p14 Primary Assembly
- Range
-
155185824..155192915 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1Â Alternate T2T-CHM13v2.0
- Range
-
154325440..154331478 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NG_029383.1: Suppressed sequence
- Description
- NG_029383.1: This RefSeq was removed because currently there is insufficient data to represent an accurate genomic sequence.
-
NM_001018021.1: Suppressed sequence
- Description
- NM_001018021.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_182741.1: Suppressed sequence
- Description
- NM_182741.1: This RefSeq was permanently suppressed because currently there is insufficient support from non-cancerous tissues for the transcript and protein.