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    WDR11-DT WDR11 divergent transcript [ Homo sapiens (human) ]

    Gene ID: 283089, updated on 10-Oct-2023

    Summary

    Official Symbol
    WDR11-DTprovided by HGNC
    Official Full Name
    WDR11 divergent transcriptprovided by HGNC
    Primary source
    HGNC:HGNC:27437
    See related
    Ensembl:ENSG00000227165 AllianceGenome:HGNC:27437
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    WDR11-AS1
    Expression
    Biased expression in brain (RPKM 1.2), thyroid (RPKM 0.1) and 4 other tissues See more
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    Genomic context

    Location:
    10q26.12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (120761812..120851179, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (121658424..121747727, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (122521324..122610691, complement)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene MED14-independent group 3 enhancer GRCh37_chr10:122263320-122264519 Neighboring gene phospholipid phosphatase 4 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:122315391-122316125 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:122334639-122335138 Neighboring gene long intergenic non-protein coding RNA 1561 Neighboring gene long intergenic non-protein coding RNA 2930 Neighboring gene NANOG hESC enhancer GRCh37_chr10:122404247-122405040 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4135 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:122558239-122558907 Neighboring gene H3K27ac hESC enhancers GRCh37_chr10:122610516-122611060 and GRCh37_chr10:122611061-122611604 Neighboring gene uncharacterized LOC105378519 Neighboring gene WD repeat domain 11 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr10:122669667-122670866 Neighboring gene Sharpr-MPRA regulatory region 5528 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_10489 Neighboring gene uncharacterized LOC105378520

    Genomic regions, transcripts, and products

    Phenotypes

    EBI GWAS Catalog

    Description
    Genetic variation modifies risk for neurodegeneration based on biomarker status.
    EBI GWAS Catalog
    Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
    EBI GWAS Catalog

    General gene information

    Markers

    Other Names

    • WDR11 antisense RNA 1 (non-protein coding)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033850.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL391425
      Related
      ENST00000628194.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      120761812..120851179 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      121658424..121747727 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)