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    CTBP1 C-terminal binding protein 1 [ Chrysemys picta bellii (western painted turtle) ]

    Gene ID: 101937446, updated on 10-Oct-2024

    Summary

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    Gene symbol
    CTBP1
    Gene description
    C-terminal binding protein 1
    See related
    Ensembl:ENSCPBG00000000892
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chrysemys picta bellii (sub-species: bellii)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
    Orthologs
    human mouse all
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    Genomic context

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    See CTBP1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 5 NC_088795.1 (127564184..127980863)
    102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281369.1 (3476959..3902774)

    Chromosome 5 - NC_088795.1Genomic Context describing neighboring genes Neighboring gene UV stimulated scaffold protein A Neighboring gene uncharacterized LOC135984018 Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene uncharacterized LOC135984019 Neighboring gene SRRM2 protein homolog rsr-2-like Neighboring gene spondin 2 Neighboring gene transmembrane emp24 domain-containing protein 11-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coregulator binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-terminal-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1138683v2

    Genomic

    1. NC_088795.1 Reference ASM1138683v2

      Range
      127564184..127980863
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_065597190.1 → XP_065453262.1  C-terminal-binding protein 1 isoform X14

      UniProtKB/TrEMBL
      A0A8C3F0K8

    2. XM_042855560.2 → XP_042711494.1  C-terminal-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      A0AAJ6RBQ7, A0AAJ6RC78
      Conserved Domains (1) summary
      cd05299
      Location:34 → 352
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    3. XM_065597166.1 → XP_065453238.1  C-terminal-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      A0AAJ6RC78

    4. XM_024106468.3 → XP_023962236.1  C-terminal-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      A0AAJ6RBQ7, A0AAJ6RC78
      Conserved Domains (1) summary
      cd05299
      Location:34 → 352
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    5. XM_065597189.1 → XP_065453261.1  C-terminal-binding protein 1 isoform X14

      UniProtKB/TrEMBL
      A0A8C3F0K8

    6. XM_065597176.1 → XP_065453248.1  C-terminal-binding protein 1 isoform X8

      UniProtKB/TrEMBL
      A0AAJ6W7A4

    7. XM_065597174.1 → XP_065453246.1  C-terminal-binding protein 1 isoform X8

      UniProtKB/TrEMBL
      A0AAJ6W7A4

    8. XM_065597194.1 → XP_065453266.1  C-terminal-binding protein 1 isoform X15

    9. XM_065597175.1 → XP_065453247.1  C-terminal-binding protein 1 isoform X8

      UniProtKB/TrEMBL
      A0AAJ6W7A4

    10. XM_065597188.1 → XP_065453260.1  C-terminal-binding protein 1 isoform X14

      UniProtKB/TrEMBL
      A0A8C3F0K8

    11. XM_065597184.1 → XP_065453256.1  C-terminal-binding protein 1 isoform X12

    12. XM_065597169.1 → XP_065453241.1  C-terminal-binding protein 1 isoform X4

    13. XM_065597193.1 → XP_065453265.1  C-terminal-binding protein 1 isoform X15

    14. XM_065597197.1 → XP_065453269.1  C-terminal-binding protein 1 isoform X16

    15. XM_065597180.1 → XP_065453252.1  C-terminal-binding protein 1 isoform X10

    16. XM_065597185.1 → XP_065453257.1  C-terminal-binding protein 1 isoform X12

    17. XM_005292416.5 → XP_005292473.1  C-terminal-binding protein 1 isoform X2

      See identical proteins and their annotated locations for XP_005292473.1

      UniProtKB/TrEMBL
      A0AAJ6RBQ7, A0AAJ6RC78
      Conserved Domains (1) summary
      cd05299
      Location:34 → 352
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    18. XM_065597170.1 → XP_065453242.1  C-terminal-binding protein 1 isoform X4

    19. XM_065597187.1 → XP_065453259.1  C-terminal-binding protein 1 isoform X14

      UniProtKB/TrEMBL
      A0A8C3F0K8

    20. XM_005292419.5 → XP_005292476.1  C-terminal-binding protein 1 isoform X8

      See identical proteins and their annotated locations for XP_005292476.1

      UniProtKB/TrEMBL
      A0AAJ6RBQ7, A0AAJ6W7A4
      Conserved Domains (1) summary
      cd05299
      Location:26 → 344
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    21. XM_005292414.5 → XP_005292471.1  C-terminal-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C3EZV8, A0AAJ6RBQ7
      Related
      ENSCPBP00000001148.1
      Conserved Domains (1) summary
      cd05299
      Location:34 → 352
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    22. XM_005292420.5 → XP_005292477.1  C-terminal-binding protein 1 isoform X14

      UniProtKB/TrEMBL
      A0A8C3F0K8, A0AAJ6RBQ7
      Related
      ENSCPBP00000001171.1
      Conserved Domains (1) summary
      cd05299
      Location:17 → 335
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    23. XM_065597195.1 → XP_065453267.1  C-terminal-binding protein 1 isoform X16

    24. XM_065597200.1 → XP_065453272.1  C-terminal-binding protein 1 isoform X18

    25. XM_065597191.1 → XP_065453263.1  C-terminal-binding protein 1 isoform X15

    26. XM_065597198.1 → XP_065453270.1  C-terminal-binding protein 1 isoform X17

    27. XM_065597173.1 → XP_065453245.1  C-terminal-binding protein 1 isoform X8

      UniProtKB/TrEMBL
      A0AAJ6W7A4

    28. XM_065597167.1 → XP_065453239.1  C-terminal-binding protein 1 isoform X3

    29. XM_065597183.1 → XP_065453255.1  C-terminal-binding protein 1 isoform X12

    30. XM_065597178.1 → XP_065453250.1  C-terminal-binding protein 1 isoform X10

    31. XM_065597182.1 → XP_065453254.1  C-terminal-binding protein 1 isoform X12

    32. XM_065597171.1 → XP_065453243.1  C-terminal-binding protein 1 isoform X5

    33. XM_065597192.1 → XP_065453264.1  C-terminal-binding protein 1 isoform X15

    34. XM_005292417.5 → XP_005292474.1  C-terminal-binding protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A8C3H5M7, A0AAJ6RBQ7
      Related
      ENSCPBP00000001161.1
      Conserved Domains (1) summary
      cd05299
      Location:28 → 346
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    35. XM_065597172.1 → XP_065453244.1  C-terminal-binding protein 1 isoform X7

    36. XM_065597177.1 → XP_065453249.1  C-terminal-binding protein 1 isoform X9

    37. XM_065597181.1 → XP_065453253.1  C-terminal-binding protein 1 isoform X11

    38. XM_065597196.1 → XP_065453268.1  C-terminal-binding protein 1 isoform X16

    39. XM_065597199.1 → XP_065453271.1  C-terminal-binding protein 1 isoform X17

    40. XM_065597179.1 → XP_065453251.1  C-terminal-binding protein 1 isoform X10

    41. XM_065597203.1 → XP_065453275.1  C-terminal-binding protein 1 isoform X18

    42. XM_065597202.1 → XP_065453274.1  C-terminal-binding protein 1 isoform X18

    43. XM_065597206.1 → XP_065453278.1  C-terminal-binding protein 1 isoform X19

    44. XM_065597208.1 → XP_065453280.1  C-terminal-binding protein 1 isoform X20

    45. XM_065597186.1 → XP_065453258.1  C-terminal-binding protein 1 isoform X13

    46. XM_065597205.1 → XP_065453277.1  C-terminal-binding protein 1 isoform X18

    47. XM_065597209.1 → XP_065453281.1  C-terminal-binding protein 1 isoform X20

    48. XM_065597204.1 → XP_065453276.1  C-terminal-binding protein 1 isoform X18

    49. XM_065597207.1 → XP_065453279.1  C-terminal-binding protein 1 isoform X19

    50. XM_065597201.1 → XP_065453273.1  C-terminal-binding protein 1 isoform X18

    Nucleotide Protein
    Heading Accession and Version

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