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    LOC115103174 aspartyl/asparaginyl beta-hydroxylase-like [ Oncorhynchus nerka (sockeye salmon) ]

    Gene ID: 115103174, updated on 8-May-2024

    Summary

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    Gene symbol
    LOC115103174
    Gene description
    aspartyl/asparaginyl beta-hydroxylase-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oncorhynchus nerka
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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    Genomic context

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    Location:
    chromosome: LG20
    Exon count:
    15
    Annotation release Status Assembly LG Location
    RS_2024_05 current Oner_Uvic_2.0 (GCF_034236695.1) LG20 NC_088415.1 (79057192..79085355, complement)
    100 previous assembly Oner_1.0 (GCF_006149115.1) LG20 NC_042554.1 (60953210..60978942, complement)

    Linkage Group LG20 - NC_088415.1Genomic Context describing neighboring genes Neighboring gene ras-related protein Rab-2A Neighboring gene chromodomain-helicase-DNA-binding protein 7-like Neighboring gene xenotropic and polytropic retrovirus receptor 1 homolog Neighboring gene tocopherol (alpha) transfer protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptidyl-aspartic acid 3-dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-aspartic acid hydroxylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aspartyl/asparaginyl beta-hydroxylase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034236695.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Oner_Uvic_2.0 Primary Assembly

    Genomic

    1. NC_088415.1 Reference Oner_Uvic_2.0 Primary Assembly

      Range
      79057192..79085355 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_065005814.1 → XP_064861886.1  aspartyl/asparaginyl beta-hydroxylase-like isoform X3

    2. XM_065005815.1 → XP_064861887.1  aspartyl/asparaginyl beta-hydroxylase-like isoform X4

    3. XM_065005816.1 → XP_064861888.1  aspartyl/asparaginyl beta-hydroxylase-like isoform X5

    4. XM_065005813.1 → XP_064861885.1  aspartyl/asparaginyl beta-hydroxylase-like isoform X2

    5. XM_065005812.1 → XP_064861884.1  aspartyl/asparaginyl beta-hydroxylase-like isoform X1

    6. XM_065005817.1 → XP_064861889.1  aspartyl/asparaginyl beta-hydroxylase-like isoform X6

    RNA

    1. XR_010460236.1 RNA Sequence

    2. XR_010460235.1 RNA Sequence

    3. XR_010460234.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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