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    Gm10409 predicted gene 10409 [ Mus musculus (house mouse) ]

    Gene ID: 100041530, updated on 17-Aug-2024

    Summary

    Official Symbol
    Gm10409provided by MGI
    Official Full Name
    predicted gene 10409provided by MGI
    Primary source
    MGI:MGI:3710610
    See related
    Ensembl:ENSMUSG00000096488 AllianceGenome:MGI:3710610
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm8348; EG666890
    Expression
    Biased expression in CNS E18 (RPKM 6.6), whole brain E14.5 (RPKM 3.4) and 10 other tissues See more
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    Genomic context

    See Gm10409 in Genome Data Viewer
    Location:
    14 A2; 14 3.7 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (19035916..19057159, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (3412614..3433857)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 7 pseudogene Neighboring gene predicted gene 10408 Neighboring gene predicted gene 10413 Neighboring gene predicted gene 2956

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Other Names

    • predicted pseudogene 8348

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033121.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK012594, BY608518, BY739387
      Related
      ENSMUST00000170123.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      19035916..19057159 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)