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    ADAT1 adenosine deaminase tRNA specific 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 468030, updated on 10-Oct-2024

    Summary

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    Official Symbol
    ADAT1provided by VGNC
    Official Full Name
    adenosine deaminase tRNA specific 1provided by VGNC
    Primary source
    VGNC:VGNC:5665
    Locus tag
    CK820_G0042708
    See related
    Ensembl:ENSPTRG00000008363
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See ADAT1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 18 NC_072416.2 (73705648..73736842, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 16 NC_072414.1 (73694065..73736918, complement)

    Chromosome 18 - NC_072416.2Genomic Context describing neighboring genes Neighboring gene transmembrane protein 231 Neighboring gene GABA type A receptor associated protein like 2 Neighboring gene lysyl-tRNA synthetase 1 Neighboring gene TERF2 interacting protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tRNA-specific adenosine deaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA-specific adenosine deaminase 1
    XP_016785690.2
    XP_016785693.2
    XP_054524447.1
    XP_063653511.1
    XP_063653512.1
    XP_063653513.1
    XP_063653514.1
    XP_063653515.1
    XP_063653516.1
    XP_063653517.1
    XP_063653518.1
    XP_063653519.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072416.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      73705648..73736842 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063797444.1 → XP_063653514.1  tRNA-specific adenosine deaminase 1 isoform X3

    2. XM_063797446.1 → XP_063653516.1  tRNA-specific adenosine deaminase 1 isoform X3

    3. XM_063797445.1 → XP_063653515.1  tRNA-specific adenosine deaminase 1 isoform X3

    4. XM_016930201.4 → XP_016785690.2  tRNA-specific adenosine deaminase 1 isoform X1

    5. XM_054668472.2 → XP_054524447.1  tRNA-specific adenosine deaminase 1 isoform X1

    6. XM_016930204.3 → XP_016785693.2  tRNA-specific adenosine deaminase 1 isoform X4

    7. XM_063797447.1 → XP_063653517.1  tRNA-specific adenosine deaminase 1 isoform X5

    8. XM_063797441.1 → XP_063653511.1  tRNA-specific adenosine deaminase 1 isoform X2

      UniProtKB/TrEMBL
      K7CWU3

    9. XM_063797449.1 → XP_063653519.1  tRNA-specific adenosine deaminase 1 isoform X6

    10. XM_063797448.1 → XP_063653518.1  tRNA-specific adenosine deaminase 1 isoform X5

    11. XM_063797442.1 → XP_063653512.1  tRNA-specific adenosine deaminase 1 isoform X2

      UniProtKB/TrEMBL
      K7CWU3

    12. XM_063797443.1 → XP_063653513.1  tRNA-specific adenosine deaminase 1 isoform X2

      UniProtKB/TrEMBL
      K7CWU3
    Nucleotide Protein
    Heading Accession and Version

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