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    LOC100969907 PI-PLC X domain-containing protein 1 [ Pan paniscus (pygmy chimpanzee) ]

    Gene ID: 100969907, updated on 8-Mar-2024

    Summary

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    Gene symbol
    LOC100969907
    Gene description
    PI-PLC X domain-containing protein 1
    See related
    Ensembl:ENSPPAG00000010808
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan paniscus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Also known as
    PLCXD1
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    Genomic context

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    See LOC100969907 in Genome Data Viewer
    Location:
    chromosome: X, chromosome: Y
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) X NC_073272.2 (91010..111582)
    RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) Y NC_073273.2 (46873352..46897697, complement)
    RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) X NC_073272.1 (94666..116153)
    RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) Y NC_073273.1 (56969..82221)

    Chromosome X - NC_073272.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134729830 Neighboring gene uncharacterized LOC134729841 Neighboring gene putative GTP-binding protein 6 Neighboring gene serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta

    Chromosome Y - NC_073273.2Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta Neighboring gene putative GTP-binding protein 6 Neighboring gene uncharacterized LOC129395598

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphoric diester hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PI-PLC X domain-containing protein 1
    Names
    phosphatidylinositol specific phospholipase C X domain containing 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Genomic

    1. NC_073272.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

      Range
      91010..111582
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_055106174.3 → XP_054962149.2  PI-PLC X domain-containing protein 1 isoform X2

    2. XM_055106176.2 → XP_054962151.1  PI-PLC X domain-containing protein 1 isoform X1

    3. XM_063601674.1 → XP_063457744.1  PI-PLC X domain-containing protein 1 isoform X1

    4. XM_055106177.2 → XP_054962152.1  PI-PLC X domain-containing protein 1 isoform X1

    5. XM_055106178.2 → XP_054962153.1  PI-PLC X domain-containing protein 1 isoform X1

    6. XM_055106175.2 → XP_054962150.1  PI-PLC X domain-containing protein 1 isoform X1

    RNA

    1. XR_008622723.3 RNA Sequence

    2. XR_008622727.3 RNA Sequence

    3. XR_008622725.3 RNA Sequence

    4. XR_008622721.3 RNA Sequence

    5. XR_008622720.3 RNA Sequence

    6. XR_008622724.3 RNA Sequence

    7. XR_008622719.3 RNA Sequence

    Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Genomic

    1. NC_073273.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

      Range
      46873352..46897697 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_057301220.2 → XP_057157203.1  PI-PLC X domain-containing protein 1 isoform X1

    2. XM_055106969.2 → XP_054962944.1  PI-PLC X domain-containing protein 1 isoform X1

    3. XM_055106971.2 → XP_054962946.1  PI-PLC X domain-containing protein 1 isoform X1

    4. XM_063602010.1 → XP_063458080.1  PI-PLC X domain-containing protein 1 isoform X1

    5. XM_055106972.2 → XP_054962947.1  PI-PLC X domain-containing protein 1 isoform X1

    6. XM_055106973.2 → XP_054962948.1  PI-PLC X domain-containing protein 1 isoform X1

    7. XM_055106970.2 → XP_054962945.1  PI-PLC X domain-containing protein 1 isoform X1

    RNA

    1. XR_008622930.2 RNA Sequence

    2. XR_008622925.2 RNA Sequence

    3. XR_008622929.2 RNA Sequence

    4. XR_008622924.2 RNA Sequence

    5. XR_008622928.2 RNA Sequence

    6. XR_010111357.1 RNA Sequence

    7. XR_008622923.2 RNA Sequence

    8. XR_008622926.2 RNA Sequence

    9. XR_008622918.2 RNA Sequence

    10. XR_008622927.2 RNA Sequence

    11. XR_008622922.2 RNA Sequence

    12. XR_008622919.2 RNA Sequence

    13. XR_008622920.2 RNA Sequence

    14. XR_008622921.2 RNA Sequence

    15. XR_008622916.2 RNA Sequence

    16. XR_008622917.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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