U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    CERS4 ceramide synthase 4 [ Pan paniscus (pygmy chimpanzee) ]

    Gene ID: 100973710, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    CERS4
    Gene description
    ceramide synthase 4
    See related
    Ensembl:ENSPPAG00000041286
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan paniscus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CERS4 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 20 NC_073269.2 (12890575..12944580)
    RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 19 NC_073268.1 (12007769..12065077)

    Chromosome 20 - NC_073269.2Genomic Context describing neighboring genes Neighboring gene C-C motif chemokine ligand 25 Neighboring gene fibrillin 3 Neighboring gene CD320 molecule Neighboring gene NADH:ubiquinone oxidoreductase subunit A7 Neighboring gene ribosomal protein S28

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sphingosine N-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ceramide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ceramide synthase 4

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Genomic

    1. NC_073269.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

      Range
      12890575..12944580
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034946886.3 → XP_034802777.1  ceramide synthase 4 isoform X2

      Conserved Domains (2) summary
      smart00724
      Location:129 → 330
      TLC; TRAM, LAG1 and CLN8 homology domains
      cd00086
      Location:71 → 126
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    2. XM_034946887.3 → XP_034802778.1  ceramide synthase 4 isoform X3

      Conserved Domains (2) summary
      smart00724
      Location:131 → 289
      TLC; TRAM, LAG1 and CLN8 homology domains
      cd00086
      Location:71 → 128
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    3. XM_034946885.3 → XP_034802776.1  ceramide synthase 4 isoform X1

      UniProtKB/TrEMBL
      A0A2R9CFQ2
      Conserved Domains (2) summary
      smart00724
      Location:131 → 332
      TLC; TRAM, LAG1 and CLN8 homology domains
      cd00086
      Location:71 → 128
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    4. XM_034946891.3 → XP_034802782.1  ceramide synthase 4 isoform X1

      UniProtKB/TrEMBL
      A0A2R9CFQ2
      Conserved Domains (2) summary
      smart00724
      Location:131 → 332
      TLC; TRAM, LAG1 and CLN8 homology domains
      cd00086
      Location:71 → 128
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    5. XM_034946888.3 → XP_034802779.1  ceramide synthase 4 isoform X1

      UniProtKB/TrEMBL
      A0A2R9CFQ2
      Conserved Domains (2) summary
      smart00724
      Location:131 → 332
      TLC; TRAM, LAG1 and CLN8 homology domains
      cd00086
      Location:71 → 128
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    6. XM_055102813.2 → XP_054958788.1  ceramide synthase 4 isoform X1

      UniProtKB/TrEMBL
      A0A2R9CFQ2

    7. XM_055102815.2 → XP_054958790.1  ceramide synthase 4 isoform X4

    8. XM_055102812.2 → XP_054958787.1  ceramide synthase 4 isoform X1

      UniProtKB/TrEMBL
      A0A2R9CFQ2

    9. XM_055102811.2 → XP_054958786.1  ceramide synthase 4 isoform X1

      UniProtKB/TrEMBL
      A0A2R9CFQ2

    10. XM_034946890.3 → XP_034802781.1  ceramide synthase 4 isoform X1

      UniProtKB/TrEMBL
      A0A2R9CFQ2
      Conserved Domains (2) summary
      smart00724
      Location:131 → 332
      TLC; TRAM, LAG1 and CLN8 homology domains
      cd00086
      Location:71 → 128
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

    11. XM_055102814.2 → XP_054958789.1  ceramide synthase 4 isoform X4

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.