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    Ndufaf5 NADH:ubiquinone oxidoreductase complex assembly factor 5 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100728734, updated on 10-Oct-2024

    Summary

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    Gene symbol
    Ndufaf5
    Gene description
    NADH:ubiquinone oxidoreductase complex assembly factor 5
    See related
    Ensembl:ENSCPOG00000014030
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Ndufaf5 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947488.1 (40182255..40214337, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176411.1 (12071567..12103711, complement)

    NW_026947488.1Genomic Context describing neighboring genes Neighboring gene SEL1L2 adaptor subunit of SYVN1 ubiquitin ligase Neighboring gene SEL1L2 adaptor subunit of SYVN1 ubiquitin ligase Neighboring gene ESF1 nucleolar pre-rRNA processing protein homolog Neighboring gene uncharacterized LOC134476047

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables S-adenosylmethionine-dependent methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial respiratory chain complex I assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    arginine-hydroxylase NDUFAF5, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947488.1 Reference mCavPor4.1

      Range
      40182255..40214337 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003476387.5 → XP_003476435.2  arginine-hydroxylase NDUFAF5, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A286XI27, H0VQ35
      Related
      ENSCPOP00000025069.1
      Conserved Domains (2) summary
      TIGR02072
      Location:78 → 310
      BioC; malonyl-acyl carrier protein O-methyltransferase BioC
      pfam08241
      Location:94 → 185
      Methyltransf_11; Methyltransferase domain

    2. XM_023560040.2 → XP_023415808.1  arginine-hydroxylase NDUFAF5, mitochondrial isoform X3

      Conserved Domains (1) summary
      cl28099
      Location:2 → 123
      SmtA; SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]

    3. XM_063248677.1 → XP_063104747.1  arginine-hydroxylase NDUFAF5, mitochondrial isoform X3

    4. XM_023560039.1 → XP_023415807.1  arginine-hydroxylase NDUFAF5, mitochondrial isoform X3

      Conserved Domains (1) summary
      cl28099
      Location:2 → 123
      SmtA; SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]

    5. XM_063248676.1 → XP_063104746.1  arginine-hydroxylase NDUFAF5, mitochondrial isoform X2

    Nucleotide Protein
    Heading Accession and Version

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