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    Nfatc2 nuclear factor of activated T cells 2 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100722868, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Nfatc2
    Gene description
    nuclear factor of activated T cells 2
    See related
    Ensembl:ENSCPOG00000012743
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Nfatc2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947488.1 (11416984..11540795)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176323.1 (4916392..5006878)

    NW_026947488.1Genomic Context describing neighboring genes Neighboring gene spalt like transcription factor 4 Neighboring gene small nucleolar RNA SNORA2/SNORA34 family Neighboring gene ATPase phospholipid transporting 9A (putative) Neighboring gene uncharacterized LOC134475964 Neighboring gene uncharacterized LOC134475966 Neighboring gene uncharacterized LOC134475866

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcineurin-NFAT signaling cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytokine production IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear factor of activated T-cells, cytoplasmic 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947488.1 Reference mCavPor4.1

      Range
      11416984..11540795
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063248152.1 → XP_063104222.1  nuclear factor of activated T-cells, cytoplasmic 2 isoform X3

    2. XM_063248155.1 → XP_063104225.1  nuclear factor of activated T-cells, cytoplasmic 2 isoform X4

    3. XM_063248151.1 → XP_063104221.1  nuclear factor of activated T-cells, cytoplasmic 2 isoform X2

    4. XM_063248150.1 → XP_063104220.1  nuclear factor of activated T-cells, cytoplasmic 2 isoform X1

    5. XM_063248153.1 → XP_063104223.1  nuclear factor of activated T-cells, cytoplasmic 2 isoform X4

    Nucleotide Protein
    Heading Accession and Version

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