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    GCH1 GTP cyclohydrolase 1 [ Lethenteron reissneri (Far Eastern brook lamprey) ]

    Gene ID: 133347249, updated on 29-Mar-2024

    Summary

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    Gene symbol
    GCH1
    Gene description
    GTP cyclohydrolase 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lethenteron reissneri
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Lethenteron
    Orthologs
    human mouse all
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    Genomic context

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    See GCH1 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_12 current ASM1570882v1 (GCF_015708825.1) 25 NC_083803.1 (12511174..12542400, complement)

    Chromosome 25 - NC_083803.1Genomic Context describing neighboring genes Neighboring gene ALK tyrosine kinase receptor-like Neighboring gene U6 spliceosomal RNA Neighboring gene protein Smaug homolog 1-like Neighboring gene uncharacterized LOC133346922 Neighboring gene ninein-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_083803.1 Chromosome 25 Reference ASM1570882v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTP cyclohydrolase I activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tetrahydrobiopterin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tetrahydrofolate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GTP cyclohydrolase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_015708825.1-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1570882v1 Primary Assembly

    Genomic

    1. NC_083803.1 Reference ASM1570882v1 Primary Assembly

      Range
      12511174..12542400 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061559359.1 → XP_061415343.1  GTP cyclohydrolase 1

    Nucleotide Protein
    Heading Accession and Version

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