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    Gm5916 predicted gene 5916 [ Mus musculus (house mouse) ]

    Gene ID: 546123, updated on 17-Aug-2024

    Summary

    Official Symbol
    Gm5916provided by MGI
    Official Full Name
    predicted gene 5916provided by MGI
    Primary source
    MGI:MGI:3643162
    See related
    Ensembl:ENSMUSG00000091411 AllianceGenome:MGI:3643162
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG546123
    Expression
    Restricted expression toward genital fat pad adult (RPKM 18.1) See more
    NEW
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    Genomic context

    See Gm5916 in Genome Data Viewer
    Location:
    9 A4; 9 20.63 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (36030660..36040141, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (36119364..36128845, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene 3428 Neighboring gene STARR-seq mESC enhancer starr_23775 Neighboring gene prostate and testis expressed 13 Neighboring gene STARR-seq mESC enhancer starr_23776 Neighboring gene STARR-seq mESC enhancer starr_23777 Neighboring gene STARR-seq mESC enhancer starr_23778 Neighboring gene STARR-seq mESC enhancer starr_23779 Neighboring gene predicted gene 3434 Neighboring gene predicted gene 3867

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    prostate and testis expressed family member

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001167587.1NP_001161059.1  prostate and testis expressed family member precursor

      See identical proteins and their annotated locations for NP_001161059.1

      Status: VALIDATED

      Source sequence(s)
      AC154630
      Consensus CDS
      CCDS52762.1
      UniProtKB/TrEMBL
      G5E8W5

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      36030660..36040141 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006510490.4XP_006510553.1  prostate and testis expressed family member isoform X1

      See identical proteins and their annotated locations for XP_006510553.1

      UniProtKB/TrEMBL
      G5E8W5
      Related
      ENSMUSP00000125855.2, ENSMUST00000168452.3