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    LOC117400396 mitogen-activated protein kinase kinase kinase 3-like [ Acipenser ruthenus (sterlet) ]

    Gene ID: 117400396, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC117400396
    Gene description
    mitogen-activated protein kinase kinase kinase 3-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acipenser ruthenus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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    Genomic context

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    See LOC117400396 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 4 NC_081192.1 (106734840..106786402)
    101 previous assembly ASM1064508v1 (GCF_010645085.1) 3 NC_048325.1 (1469063..1519607)

    Chromosome 4 - NC_081192.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase OSR1-like Neighboring gene myeloid differentiation primary response protein MyD88-like Neighboring gene 3-ketoacyl-CoA thiolase B, peroxisomal-like Neighboring gene 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1-like Neighboring gene U6atac minor spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitogen-activated protein kinase kinase kinase 3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fAciRut3.2 maternal haplotype Primary Assembly

    Genomic

    1. NC_081192.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

      Range
      106734840..106786402
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034000294.3 → XP_033856185.1  mitogen-activated protein kinase kinase kinase 3-like isoform X3

      UniProtKB/TrEMBL
      A0A662YTU7
      Conserved Domains (2) summary
      cd06405
      Location:46 → 124
      PB1_Mekk2_3; The PB1 domain is present in the two mitogen-activated protein kinase kinases MEKK2 and MEKK3 which are two members of the signaling kinase cascade involved in angiogenesis and early cardiovascular development. The PB1 domain of MEKK2 (and/or MEKK3) ...
      cl21453
      Location:340 → 602
      PKc_like; Protein Kinases, catalytic domain

    2. XM_034000293.3 → XP_033856184.1  mitogen-activated protein kinase kinase kinase 3-like isoform X2

      Conserved Domains (2) summary
      cd06405
      Location:45 → 123
      PB1_Mekk2_3; The PB1 domain is present in the two mitogen-activated protein kinase kinases MEKK2 and MEKK3 which are two members of the signaling kinase cascade involved in angiogenesis and early cardiovascular development. The PB1 domain of MEKK2 (and/or MEKK3) ...
      cl21453
      Location:343 → 605
      PKc_like; Protein Kinases, catalytic domain

    3. XM_034000292.3 → XP_033856183.1  mitogen-activated protein kinase kinase kinase 3-like isoform X1

      UniProtKB/TrEMBL
      A0A662YTU7
      Conserved Domains (2) summary
      cd06405
      Location:46 → 124
      PB1_Mekk2_3; The PB1 domain is present in the two mitogen-activated protein kinase kinases MEKK2 and MEKK3 which are two members of the signaling kinase cascade involved in angiogenesis and early cardiovascular development. The PB1 domain of MEKK2 (and/or MEKK3) ...
      cl21453
      Location:344 → 606
      PKc_like; Protein Kinases, catalytic domain

    4. XM_059023381.1 → XP_058879364.1  mitogen-activated protein kinase kinase kinase 3-like isoform X4

    5. XM_059023379.1 → XP_058879362.1  mitogen-activated protein kinase kinase kinase 3-like isoform X1

    Nucleotide Protein
    Heading Accession and Version

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