U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    SNX13 sorting nexin 13 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100345245, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    SNX13
    Gene description
    sorting nexin 13
    See related
    Ensembl:ENSOCUG00000001142
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SNX13 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 10 NC_067383.1 (87954..228500, complement)

    Chromosome 10 - NC_067383.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127492593 Neighboring gene short coiled-coil protein-like Neighboring gene uncharacterized LOC127492656 Neighboring gene phosphoribosyl pyrophosphate synthetase 1 like 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_067383.1 Chromosome 10 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in early endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    sorting nexin-13

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067383.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      87954..228500 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051853221.1 → XP_051709181.1  sorting nexin-13 isoform X10

    2. XM_051853217.1 → XP_051709177.1  sorting nexin-13 isoform X8

    3. XM_051853220.1 → XP_051709180.1  sorting nexin-13 isoform X9

    4. XM_051853215.1 → XP_051709175.1  sorting nexin-13 isoform X6

    5. XM_051853212.1 → XP_051709172.1  sorting nexin-13 isoform X5

    6. XM_051853214.1 → XP_051709174.1  sorting nexin-13 isoform X5

    7. XM_051853213.1 → XP_051709173.1  sorting nexin-13 isoform X5

    8. XM_051853222.1 → XP_051709182.1  sorting nexin-13 isoform X11

    9. XM_051853218.1 → XP_051709178.1  sorting nexin-13 isoform X8

    10. XM_051853210.1 → XP_051709170.1  sorting nexin-13 isoform X3

    11. XM_051853207.1 → XP_051709167.1  sorting nexin-13 isoform X1

    12. XM_051853209.1 → XP_051709169.1  sorting nexin-13 isoform X2

    13. XM_051853211.1 → XP_051709171.1  sorting nexin-13 isoform X4

    14. XM_051853216.1 → XP_051709176.1  sorting nexin-13 isoform X7

    15. XM_051853223.1 → XP_051709183.1  sorting nexin-13 isoform X12

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.