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    LOC109597373 protein MTSS 1 [ Aethina tumida (small hive beetle) ]

    Gene ID: 109597373, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC109597373
    Gene description
    protein MTSS 1
    See related
    EnsemblRapid:ENSATDG00005002644
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Aethina tumida
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Nitidulidae; Nitidulinae; Aethina
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC109597373 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    101 current icAetTumi1.1 (GCF_024364675.1) 1 NC_065435.1 (58080343..58158986, complement)
    100 previous assembly Atum_1.0 (GCF_001937115.1) Unplaced Scaffold NW_017853062.1 (13501..92264, complement)

    Chromosome 1 - NC_065435.1Genomic Context describing neighboring genes Neighboring gene mitochondrial transcription factor B2 Neighboring gene mitochondrial ribosomal protein S18A Neighboring gene larval cuticle protein A2B Neighboring gene putative gustatory receptor 28a Neighboring gene V-type proton ATPase 21 kDa proteolipid subunit c''-like Neighboring gene CCR4-NOT transcription complex subunit 10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell projection assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in plasma membrane organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasmic side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein MTSS 1; uncharacterized protein LOC109597373
    Names
    MTSS1-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Aethina tumida Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icAetTumi1.1 Primary Assembly

    Genomic

    1. NC_065435.1 Reference icAetTumi1.1 Primary Assembly

      Range
      58080343..58158986 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_049961922.1 → XP_049817879.1  protein MTSS 1 isoform X6

    2. XM_020013034.2 → XP_019868593.1  protein MTSS 1 isoform X5

      Related
      ENSATDP00005004546.1, ENSATDT00005004673.1
      Conserved Domains (2) summary
      cl12013
      Location:19 → 247
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
      cl26464
      Location:342 → 626
      Atrophin-1; Atrophin-1 family

    3. XM_049961924.1 → XP_049817881.1  protein MTSS 1 isoform X8

    4. XM_049961921.1 → XP_049817878.1  protein MTSS 1 isoform X4

    5. XM_049961920.1 → XP_049817877.1  uncharacterized protein LOC109597373 isoform X3

    6. XM_049961923.1 → XP_049817880.1  protein MTSS 1 isoform X7

    7. XM_049961919.1 → XP_049817876.1  uncharacterized protein LOC109597373 isoform X2

    8. XM_049961918.1 → XP_049817875.1  protein MTSS 1 isoform X1

      Related
      ENSATDP00005004556.1, ENSATDT00005004682.1
    Nucleotide Protein
    Heading Accession and Version

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