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    LOC119381665 sodium/hydrogen exchanger 10 [ Rhipicephalus sanguineus (brown dog tick) ]

    Gene ID: 119381665, updated on 27-Mar-2024

    Summary

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    Gene symbol
    LOC119381665
    Gene description
    sodium/hydrogen exchanger 10
    See related
    VectorBase:RSAN_047037; EnsemblRapid:LOC119381665
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rhipicephalus sanguineus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Rhipicephalus
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    Genomic context

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    See LOC119381665 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current BIME_Rsan_1.4 (GCF_013339695.2) 2 NC_051177.1 (73821495..73826847, complement)
    100 previous assembly ASM1333969v1 (GCF_013339695.1) 2 NC_051177.1 (73821217..73826847, complement)

    Chromosome 2 - NC_051177.1Genomic Context describing neighboring genes Neighboring gene dopamine receptor 1 Neighboring gene uncharacterized LOC119381664 Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene Negative elongation factor A Neighboring gene uncharacterized LOC119383179 Neighboring gene alpha2-adrenergic-like octopamine receptor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sodium:proton antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium/hydrogen exchanger 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rhipicephalus sanguineus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BIME_Rsan_1.4

    Genomic

    1. NC_051177.1 Reference BIME_Rsan_1.4

      Range
      73821495..73826847 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037649438.2 → XP_037505366.1  sodium/hydrogen exchanger 10

      UniProtKB/TrEMBL
      A0A9D4T3M2
      Related
      XP_037505366.1, XM_037649438.2
      Conserved Domains (2) summary
      cd00038
      Location:898 → 1009
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      cl01133
      Location:81 → 422
      Na_H_Exchanger; Sodium/hydrogen exchanger family
    Nucleotide Protein
    Heading Accession and Version

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