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    DPF1 double PHD fingers 1 [ Canis lupus dingo (dingo) ]

    Gene ID: 112645533, updated on 10-Oct-2024

    Summary

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    Gene symbol
    DPF1
    Gene description
    double PHD fingers 1
    See related
    Ensembl:ENSCAFG00020017883
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus dingo (sub-species: dingo)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See DPF1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    102 current ASM325472v2 (GCF_003254725.2) 1 NC_064243.1 (114880132..114893480)
    101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 1 Unlocalized Scaffold NW_023365038.1 (115678957..115692272)

    Chromosome 1 - NC_064243.1Genomic Context describing neighboring genes Neighboring gene U4 spliceosomal RNA Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 14A Neighboring gene signal induced proliferation associated 1 like 3 Neighboring gene uncharacterized LOC118351718 Neighboring gene uncharacterized LOC112645537

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nBAF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein neuro-d4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM325472v2

    Genomic

    1. NC_064243.1 Reference ASM325472v2

      Range
      114880132..114893480
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025425134.3 → XP_025280919.1  zinc finger protein neuro-d4 isoform X9

      UniProtKB/TrEMBL
      A0A8C0KVF6
      Conserved Domains (4) summary
      COG5189
      Location:184 → 218
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      cd15530
      Location:309 → 368
      PHD2_d4; PHD finger 2 found in d4 gene family proteins
      cd15690
      Location:251 → 308
      PHD1_DPF1; PHD finger 1 found in D4, zinc and double PHD fingers family 1 (DPF1)
      pfam14051
      Location:13 → 79
      Requiem_N; N-terminal domain of DPF2/REQ

    2. XM_049095304.1 → XP_048951261.1  zinc finger protein neuro-d4 isoform X8

    3. XM_049095315.1 → XP_048951272.1  zinc finger protein neuro-d4 isoform X13

    4. XM_049095298.1 → XP_048951255.1  zinc finger protein neuro-d4 isoform X2

    5. XM_025425125.3 → XP_025280910.1  zinc finger protein neuro-d4 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KVF6
      Conserved Domains (4) summary
      COG5189
      Location:186 → 220
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      cd15530
      Location:328 → 387
      PHD2_d4; PHD finger 2 found in d4 gene family proteins
      cd15690
      Location:270 → 327
      PHD1_DPF1; PHD finger 1 found in D4, zinc and double PHD fingers family 1 (DPF1)
      pfam14051
      Location:13 → 79
      Requiem_N; N-terminal domain of DPF2/REQ

    6. XM_049095303.1 → XP_048951260.1  zinc finger protein neuro-d4 isoform X4

    7. XM_025425137.3 → XP_025280922.1  zinc finger protein neuro-d4 isoform X12

      UniProtKB/TrEMBL
      A0A8C0KVF6
      Conserved Domains (4) summary
      COG5189
      Location:184 → 218
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      cd15530
      Location:309 → 354
      PHD2_d4; PHD finger 2 found in d4 gene family proteins
      cd15690
      Location:251 → 308
      PHD1_DPF1; PHD finger 1 found in D4, zinc and double PHD fingers family 1 (DPF1)
      pfam14051
      Location:13 → 79
      Requiem_N; N-terminal domain of DPF2/REQ

    8. XM_049095300.1 → XP_048951257.1  zinc finger protein neuro-d4 isoform X3

      UniProtKB/TrEMBL
      A0A8C0STW2

    9. XM_025425131.3 → XP_025280916.1  zinc finger protein neuro-d4 isoform X6

      UniProtKB/TrEMBL
      A0A8C0KVF6
      Conserved Domains (4) summary
      COG5189
      Location:186 → 220
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      cd15530
      Location:328 → 373
      PHD2_d4; PHD finger 2 found in d4 gene family proteins
      cd15690
      Location:270 → 327
      PHD1_DPF1; PHD finger 1 found in D4, zinc and double PHD fingers family 1 (DPF1)
      pfam14051
      Location:13 → 79
      Requiem_N; N-terminal domain of DPF2/REQ

    10. XM_049095308.1 → XP_048951265.1  zinc finger protein neuro-d4 isoform X11

    11. XM_025425139.3 → XP_025280924.1  zinc finger protein neuro-d4 isoform X15

      UniProtKB/TrEMBL
      A0A8C0KVF6
      Conserved Domains (4) summary
      COG5189
      Location:130 → 164
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      cd15530
      Location:272 → 331
      PHD2_d4; PHD finger 2 found in d4 gene family proteins
      cd15690
      Location:214 → 271
      PHD1_DPF1; PHD finger 1 found in D4, zinc and double PHD fingers family 1 (DPF1)
      pfam14051
      Location:1 → 23
      Requiem_N; N-terminal domain of DPF2/REQ

    12. XM_025425130.3 → XP_025280915.1  zinc finger protein neuro-d4 isoform X5

      UniProtKB/TrEMBL
      A0A8C0KVF6
      Conserved Domains (4) summary
      COG5189
      Location:212 → 246
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      cd15530
      Location:354 → 413
      PHD2_d4; PHD finger 2 found in d4 gene family proteins
      cd15690
      Location:296 → 353
      PHD1_DPF1; PHD finger 1 found in D4, zinc and double PHD fingers family 1 (DPF1)
      pfam14051
      Location:39 → 105
      Requiem_N; N-terminal domain of DPF2/REQ

    13. XM_049095318.1 → XP_048951275.1  zinc finger protein neuro-d4 isoform X14

      UniProtKB/TrEMBL
      A0A8C0N5A2, A0A8I3N4V1

    14. XM_025425132.3 → XP_025280917.1  zinc finger protein neuro-d4 isoform X7

      UniProtKB/TrEMBL
      A0A8C0KVF6
      Related
      ENSCAFP00020022718.1
      Conserved Domains (4) summary
      COG5189
      Location:212 → 246
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      cd15530
      Location:354 → 409
      PHD2_d4; PHD finger 2 found in d4 gene family proteins
      cd15690
      Location:296 → 353
      PHD1_DPF1; PHD finger 1 found in D4, zinc and double PHD fingers family 1 (DPF1)
      pfam14051
      Location:39 → 105
      Requiem_N; N-terminal domain of DPF2/REQ

    15. XM_025425135.3 → XP_025280920.1  zinc finger protein neuro-d4 isoform X10

      UniProtKB/TrEMBL
      A0A8C0KVF6, A0A8C0N125
      Conserved Domains (4) summary
      COG5189
      Location:212 → 246
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      cd15530
      Location:354 → 399
      PHD2_d4; PHD finger 2 found in d4 gene family proteins
      cd15690
      Location:296 → 353
      PHD1_DPF1; PHD finger 1 found in D4, zinc and double PHD fingers family 1 (DPF1)
      pfam14051
      Location:39 → 105
      Requiem_N; N-terminal domain of DPF2/REQ

    16. XM_049095326.1 → XP_048951283.1  zinc finger protein neuro-d4 isoform X15

    RNA

    1. XR_007402857.1 RNA Sequence

    2. XR_007402856.1 RNA Sequence

    3. XR_007402854.1 RNA Sequence

    4. XR_007402855.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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