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    LOC100383309 hydroxyproline-rich glycoprotein family protein [ Zea mays ]

    Gene ID: 100383309, updated on 18-Aug-2023

    Summary

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    Gene symbol
    LOC100383309
    Gene description
    hydroxyproline-rich glycoprotein family protein
    Locus tag
    ZEAMMB73_Zm00001d001894
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G081445
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    Genomic context

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    See LOC100383309 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 2 NC_050097.1 (2769721..2772320)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 2 NC_024460.2 (2491277..2493876)

    Chromosome 2 - NC_050097.1Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon CGC) Neighboring gene transfer RNA alanine (anticodon CGC) Neighboring gene plant UBX domain-containing protein 7 Neighboring gene putative phytol kinase, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
    2. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC100383309

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001175967.1 → NP_001169438.1  uncharacterized protein LOC100383309

      See identical proteins and their annotated locations for NP_001169438.1

      Status: PREDICTED

      Source sequence(s)
      BT066872
      UniProtKB/TrEMBL
      A0A3L6FT20, C0PF03
      Conserved Domains (1) summary
      cl23759
      Location:71 → 154
      GT1; GT1, myb-like, SANT family

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050097.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      2769721..2772320
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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