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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001136042.2 → NP_001129514.2 PTGES3L-AARSD1 protein isoform 1
See identical proteins and their annotated locations for NP_001129514.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AF039235, AI312767, AK295447
- UniProtKB/TrEMBL
-
B3KSP9
- Related
- ENSP00000409924.2, ENST00000421990.7
- Conserved Domains (3) summary
-
- cd00237
Location:48 → 153
- p23; p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.
- COG2872
Location:217 → 422
- AlaX; Ser-tRNA(Ala) deacylase AlaX (editing enzyme) [Translation, ribosomal structure and biogenesis]
- cl08469
Location:214 → 410
- tRNA_SAD; Threonyl and Alanyl tRNA synthetase second additional domain
-
NM_025267.4 → NP_079543.1 PTGES3L-AARSD1 protein isoform 2
See identical proteins and their annotated locations for NP_079543.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at an alternate in-frame downstream start codon, compared to variant 1. The resulting isoform (2) is shorter at the N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC055866, AF039235, BC019324
- UniProtKB/TrEMBL
-
B3KSP9
- Related
- ENSP00000353355.4, ENST00000360221.8
- Conserved Domains (3) summary
-
- cd00237
Location:1 → 92
- p23; p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.
- COG2872
Location:156 → 361
- AlaX; Ser-tRNA(Ala) deacylase AlaX (editing enzyme) [Translation, ribosomal structure and biogenesis]
- cl28133
Location:91 → 214
- tRNA-synt_2c; tRNA synthetases class II (A)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000017.11 Reference GRCh38.p14 Primary Assembly
- Range
-
42950526..42980528 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060941.1 Alternate T2T-CHM13v2.0
- Range
-
43807669..43837800 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)