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    UBE2E3 ubiquitin conjugating enzyme E2 E3 [ Gallus gallus (chicken) ]

    Gene ID: 424122, updated on 10-Oct-2024

    Summary

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    Official Symbol
    UBE2E3provided by CGNC
    Official Full Name
    ubiquitin conjugating enzyme E2 E3provided by CGNC
    Primary source
    CGNC:14325
    See related
    Ensembl:ENSGALG00010026078
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    yeast)
    Orthologs
    human mouse all
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    Genomic context

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    See UBE2E3 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 7 NC_052538.1 (14132906..14189226, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 7 NC_052579.1 (14058424..14114719, complement)

    Chromosome 7 - NC_052538.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107053809 Neighboring gene ceramide kinase like Neighboring gene integrin subunit alpha 4 Neighboring gene uncharacterized LOC121113386 Neighboring gene CWC22 spliceosome associated protein homolog Neighboring gene zinc finger protein 385B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index. Carre W, et al. Physiol Genomics, 2006 May 16. PMID 16554550
    2. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin conjugating enzyme activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin-conjugating enzyme E2 E3
    Names
    ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
    NP_001182353.1
    XP_015144922.1
    XP_015144923.1
    XP_040559366.1
    XP_040559367.1
    XP_046777319.1
    XP_046777320.1
    XP_046777321.1
    XP_046777322.1
    XP_046777323.1
    XP_046777324.1
    XP_046777325.1
    XP_046777326.1
    XP_046799542.1
    XP_046799543.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001195424.2 → NP_001182353.1  ubiquitin-conjugating enzyme E2 E3

      See identical proteins and their annotated locations for NP_001182353.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000236
      UniProtKB/TrEMBL
      A0A8V1A052
      Conserved Domains (1) summary
      pfam00179
      Location:65 → 202
      UQ_con; Ubiquitin-conjugating enzyme

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      14132906..14189226 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015289437.4 → XP_015144923.1  ubiquitin-conjugating enzyme E2 E3 isoform X3

      Conserved Domains (1) summary
      pfam00179
      Location:65 → 185
      UQ_con; Ubiquitin-conjugating enzyme

    2. XM_015289436.4 → XP_015144922.1  ubiquitin-conjugating enzyme E2 E3 isoform X1

      UniProtKB/TrEMBL
      A0A8V1A052
      Related
      ENSGALP00010039240.1, ENSGALT00010063573.1
      Conserved Domains (1) summary
      pfam00179
      Location:65 → 202
      UQ_con; Ubiquitin-conjugating enzyme

    3. XM_046943586.1 → XP_046799542.1  ubiquitin-conjugating enzyme E2 E3 isoform X1

    4. XM_040703432.2 → XP_040559366.1  ubiquitin-conjugating enzyme E2 E3 isoform X1

      UniProtKB/TrEMBL
      A0A8V1A052
      Conserved Domains (1) summary
      pfam00179
      Location:65 → 202
      UQ_con; Ubiquitin-conjugating enzyme

    5. XM_040703433.2 → XP_040559367.1  ubiquitin-conjugating enzyme E2 E3 isoform X2

      UniProtKB/TrEMBL
      A0A8V1AAE3
      Related
      ENSGALP00010039238.1, ENSGALT00010063568.1
      Conserved Domains (1) summary
      COG5078
      Location:71 → 194
      COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]

    6. XM_046943587.1 → XP_046799543.1  ubiquitin-conjugating enzyme E2 E3 isoform X4

    RNA

    1. XR_001467424.4 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      14058424..14114719 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046921369.1 → XP_046777325.1  ubiquitin-conjugating enzyme E2 E3 isoform X3

    2. XM_046921366.1 → XP_046777322.1  ubiquitin-conjugating enzyme E2 E3 isoform X1

    3. XM_046921364.1 → XP_046777320.1  ubiquitin-conjugating enzyme E2 E3 isoform X6

    4. XM_046921365.1 → XP_046777321.1  ubiquitin-conjugating enzyme E2 E3 isoform X7

    5. XM_046921363.1 → XP_046777319.1  ubiquitin-conjugating enzyme E2 E3 isoform X5

    6. XM_046921367.1 → XP_046777323.1  ubiquitin-conjugating enzyme E2 E3 isoform X2

    7. XM_046921370.1 → XP_046777326.1  ubiquitin-conjugating enzyme E2 E3 isoform X4

    8. XM_046921368.1 → XP_046777324.1  ubiquitin-conjugating enzyme E2 E3 isoform X8

    RNA

    1. XR_006935216.1 RNA Sequence

    2. XR_006935215.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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