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    CtBP C-terminal binding protein [ Drosophila grimshawi ]

    Gene ID: 6563803, updated on 23-May-2024

    Summary

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    Gene symbol
    CtBP
    Gene description
    C-terminal binding protein
    Locus tag
    Dgri_GH18368
    See related
    EnsemblRapid:LOC6563803
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila grimshawi
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
    Also known as
    CtBP-PA; GH18368; Dgri\CtBP; GH18368-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See CtBP in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025063098.1 (6547064..6560857)
    102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961675.1 (6584875..6598264, complement)

    NW_025063098.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6563806 Neighboring gene protein MEMO1 Neighboring gene uncharacterized LOC6563805 Neighboring gene traB domain-containing protein Neighboring gene uncharacterized LOC116805489 Neighboring gene lethal (3) 87Df

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Developmental expression and phylogenetic conservation of alternatively spliced forms of the C-terminal binding protein corepressor. Mani-Telang P, et al. Dev Genes Evol, 2007 Feb. PMID 17120023, Free PMC Article
    2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-terminal-binding protein
    Names
    Dgri\CtBP-PA
    Dgri\GH18368
    Dgri\GH18368-PA
    dgri_GLEANR_2751

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1815329v1

    Genomic

    1. NW_025063098.1 Reference ASM1815329v1

      Range
      6547064..6560857
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043215184.1 → XP_043071119.1  C-terminal-binding protein isoform X7

      Related
      XP_043071119.1, XM_043215184.1

    2. XM_032737665.2 → XP_032593556.1  C-terminal-binding protein isoform X4

      Related
      XP_032593556.1, XM_032737665.2
      Conserved Domains (1) summary
      cd05299
      Location:28 → 342
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    3. XM_043215185.1 → XP_043071120.1  C-terminal-binding protein isoform X9

      Related
      XP_043071120.1, XM_043215185.1

    4. XM_032737663.2 → XP_032593554.1  C-terminal-binding protein isoform X2

      Related
      XP_032593554.1, XM_032737663.2
      Conserved Domains (1) summary
      cd05299
      Location:28 → 342
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    5. XM_032737668.2 → XP_032593559.1  C-terminal-binding protein isoform X9

      Related
      XP_032593559.1, XM_032737668.2
      Conserved Domains (1) summary
      cd05299
      Location:28 → 342
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    6. XM_043215183.1 → XP_043071118.1  C-terminal-binding protein isoform X7

      Related
      XP_043071118.1, XM_043215183.1

    7. XM_032737664.2 → XP_032593555.1  C-terminal-binding protein isoform X3

      Related
      XP_032593555.1, XM_032737664.2
      Conserved Domains (1) summary
      cd05299
      Location:28 → 345
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    8. XM_032737662.2 → XP_032593553.1  C-terminal-binding protein isoform X1

      Related
      XP_032593553.1, XM_032737662.2
      Conserved Domains (1) summary
      cd05299
      Location:28 → 345
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    9. XM_001990152.3 → XP_001990188.1  C-terminal-binding protein isoform X5

      See identical proteins and their annotated locations for XP_001990188.1

      UniProtKB/TrEMBL
      B4JEW9
      Related
      XP_001990188.1, XM_001990152.3
      Conserved Domains (2) summary
      COG1052
      Location:45 → 354
      LdhA; Lactate dehydrogenase or related 2-hydroxyacid dehydrogenase [Energy production and conversion, Coenzyme transport and metabolism, General function prediction only]
      cd05299
      Location:28 → 345
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    10. XM_032737666.2 → XP_032593557.1  C-terminal-binding protein isoform X6

      Related
      XP_032593557.1, XM_032737666.2
      Conserved Domains (1) summary
      cd05299
      Location:28 → 342
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    11. XM_032737667.2 → XP_032593558.1  C-terminal-binding protein isoform X8

      Related
      XP_032593558.1, XM_032737667.2
      Conserved Domains (1) summary
      cd05299
      Location:28 → 345
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
    Nucleotide Protein
    Heading Accession and Version

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