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    LOC6560609 high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8 [ Drosophila grimshawi ]

    Gene ID: 6560609, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6560609
    Gene description
    high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8
    Locus tag
    Dgri_GH20665
    See related
    EnsemblRapid:LOC6560609
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila grimshawi
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian Drosophila
    Also known as
    GH20665; GH20665-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6560609 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current ASM1815329v1 (GCF_018153295.1) Unplaced Scaffold NW_025062889.1 (8552376..8562337, complement)
    102 previous assembly dgri_caf1 (GCF_000005155.2) Unplaced Scaffold NW_001961673.1 (4540937..4550388, complement)

    NW_025062889.1Genomic Context describing neighboring genes Neighboring gene sulfotransferase 1A3 Neighboring gene sulfotransferase 1 family member D1 Neighboring gene protein dead ringer Neighboring gene aquaporin Neighboring gene aquaporin AQPcic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3',5'-cyclic-nucleotide phosphodiesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of ERK1 and ERK2 cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8
    Names
    Dgri\GH20665
    Dgri\GH20665-PA
    dgri_GLEANR_4897

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila grimshawi Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1815329v1

    Genomic

    1. NW_025062889.1 Reference ASM1815329v1

      Range
      8552376..8562337 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032734237.2 → XP_032590128.1  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8 isoform X2

      Related
      XP_032590128.1, XM_032734237.2
      Conserved Domains (2) summary
      pfam00233
      Location:811 → 1051
      PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
      pfam00989
      Location:507 → 598
      PAS; PAS fold

    2. XM_032734235.2 → XP_032590126.1  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8 isoform X1

      Related
      XP_032590126.1, XM_032734235.2
      Conserved Domains (2) summary
      pfam00233
      Location:820 → 1060
      PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
      pfam00989
      Location:507 → 598
      PAS; PAS fold
    Nucleotide Protein
    Heading Accession and Version

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