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    card11.L caspase recruitment domain family member 11 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 108701496, updated on 11-Apr-2024

    Summary

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    Official Symbol
    card11.L
    Official Full Name
    caspase recruitment domain family member 11 L homeolog
    Primary source
    Xenbase:XB-GENE-17331454
    Locus tag
    XELAEV_18045037mg
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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    Genomic context

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    See card11.L in Genome Data Viewer
    Location:
    chromosome: 9_10L
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (94706239..94764910)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (84126379..84184984)

    Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein with EGF like and two follistatin like domains 2 L homeolog Neighboring gene post-GPI attachment to proteins 1 L homeolog Neighboring gene uncharacterized LOC121398378 Neighboring gene WD repeat domain, phosphoinositide interacting 2 L homeolog Neighboring gene DnaJ heat shock protein family (Hsp40) member B11 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables CARD domain binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within positive regulation of canonical NF-kappaB signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    caspase recruitment domain-containing protein 11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      94706239..94764910
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041576554.1 → XP_041432488.1  caspase recruitment domain-containing protein 11 isoform X2

      UniProtKB/TrEMBL
      A0A8J1LSF9
      Conserved Domains (4) summary
      COG1196
      Location:129 → 417
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd00992
      Location:691 → 763
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cl14633
      Location:16 → 100
      DD; Death Domain Superfamily of protein-protein interaction domains
      cl17036
      Location:785 → 850
      SH3; Src Homology 3 domain superfamily

    2. XM_018236247.2 → XP_018091736.1  caspase recruitment domain-containing protein 11 isoform X1

      UniProtKB/TrEMBL
      A0A1L8EX75, A0A974C005
    Nucleotide Protein Strain
    Heading Accession and Version

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