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    LOC100814450 pentatricopeptide repeat-containing protein At5g61370, mitochondrial [ Glycine max (soybean) ]

    Gene ID: 100814450, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100814450
    Gene description
    pentatricopeptide repeat-containing protein At5g61370, mitochondrial
    Locus tag
    GLYMA_17G102300v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    Location:
    chromosome: 17
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 17 NC_038253.2 (8023045..8026238)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 17 NC_038253.1 (8024099..8027870)

    Chromosome 17 - NC_038253.2Genomic Context describing neighboring genes Neighboring gene protein NEN1 Neighboring gene two-component response regulator-like APRR1 Neighboring gene probable xyloglucan 6-xylosyltransferase 5 Neighboring gene uncharacterized LOC102664729

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pentatricopeptide repeat-containing protein At5g61370, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038253.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      8023045..8026238
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014769690.3 → XP_014625176.1  pentatricopeptide repeat-containing protein At5g61370, mitochondrial

      UniProtKB/TrEMBL
      K7MKY1
      Conserved Domains (3) summary
      PLN03218
      Location:243 → 431
      PLN03218; maturation of RBCL 1; Provisional
      sd00004
      Location:296 → 323
      PPR; PPR repeat [structural motif]
      pfam13041
      Location:219 → 263
      PPR_2; PPR repeat family

    RNA

    1. XR_005889313.1 RNA Sequence

    2. XR_001385714.3 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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