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    LOC100818901 uncharacterized LOC100818901 [ Glycine max (soybean) ]

    Gene ID: 100818901, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100818901
    Gene description
    uncharacterized LOC100818901
    Locus tag
    GLYMA_03G258000v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100818901 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 3 NC_016090.4 (46412783..46417881)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 3 NC_016090.3 (45241390..45246484)

    Chromosome 3 - NC_016090.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102662514 Neighboring gene aspartyl protease family protein 2 Neighboring gene transcription factor MTB1 Neighboring gene ethylene-responsive transcription factor ERF023

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription initiation by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC100818901

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_016090.4 Reference Glycine_max_v4.0 Primary Assembly

      Range
      46412783..46417881
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003520826.5 → XP_003520874.1  uncharacterized protein LOC100818901

      UniProtKB/TrEMBL
      I1JS05
      Conserved Domains (3) summary
      pfam02229
      Location:124 → 171
      PC4; Transcriptional Coactivator p15 (PC4)
      pfam08766
      Location:4 → 59
      DEK_C; DEK C terminal domain
      pfam14223
      Location:332 → 466
      Retrotran_gag_2; gag-polypeptide of LTR copia-type
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases