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    ARFGAP2 ARF GTPase activating protein 2 [ Oryx dammah (scimitar-horned oryx) ]

    Gene ID: 120876945, updated on 20-Sep-2024

    Summary

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    Gene symbol
    ARFGAP2
    Gene description
    ARF GTPase activating protein 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryx dammah
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx
    Orthologs
    human mouse all
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    Genomic context

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    See ARFGAP2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    100 current SCBI_Odam_1.1 (GCF_014754425.2) Unplaced Scaffold NW_024070201.1 (74639469..74649998, complement)

    NW_024070201.1Genomic Context describing neighboring genes Neighboring gene LDL receptor related protein 4 Neighboring gene centriolar satellite-associated tubulin polyglutamylase complex regulator 1 Neighboring gene protein kinase C and casein kinase substrate in neurons 3 Neighboring gene damage specific DNA binding protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024070201 Unplaced Scaffold Reference SCBI_Odam_1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in COPI coating of Golgi vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor GTPase-activating protein 2
    Names
    ADP ribosylation factor GTPase activating protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryx dammah Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SCBI_Odam_1.1 Primary Assembly

    Genomic

    1. NW_024070201.1 Reference SCBI_Odam_1.1 Primary Assembly

      Range
      74639469..74649998 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040259150.1 → XP_040115084.1  ADP-ribosylation factor GTPase-activating protein 2 isoform X2

      Conserved Domains (2) summary
      PLN03114
      Location:1 → 470
      PLN03114; ADP-ribosylation factor GTPase-activating protein AGD10; Provisional
      cd09029
      Location:5 → 124
      ArfGap_ArfGap2; Arf1 GTPase-activating protein 2

    2. XM_040259149.1 → XP_040115083.1  ADP-ribosylation factor GTPase-activating protein 2 isoform X1

      Conserved Domains (2) summary
      PLN03114
      Location:1 → 484
      PLN03114; ADP-ribosylation factor GTPase-activating protein AGD10; Provisional
      cd09029
      Location:5 → 124
      ArfGap_ArfGap2; Arf1 GTPase-activating protein 2

    3. XM_040259152.1 → XP_040115086.1  ADP-ribosylation factor GTPase-activating protein 2 isoform X3

      Conserved Domains (2) summary
      PLN03114
      Location:1 → 441
      PLN03114; ADP-ribosylation factor GTPase-activating protein AGD10; Provisional
      cd09029
      Location:5 → 124
      ArfGap_ArfGap2; Arf1 GTPase-activating protein 2
    Nucleotide Protein
    Heading Accession and Version

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