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    galk1 galactokinase 1 [ Polypterus senegalus (gray bichir) ]

    Gene ID: 120517126, updated on 8-May-2024

    Summary

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    Gene symbol
    galk1
    Gene description
    galactokinase 1
    Locus tag
    GTO96_0011527
    See related
    EnsemblRapid:ENSSTSG00000025860
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Polypterus senegalus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Polypteriformes; Polypteridae; Polypterus
    Orthologs
    human zebrafish all
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    Genomic context

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    See galk1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current ASM1683550v1 (GCF_016835505.1) 17 NC_053170.1 (90823176..90853108)

    Chromosome 17 - NC_053170.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120517463 Neighboring gene potassium-transporting ATPase alpha chain 2-like Neighboring gene transmembrane protein 94 Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 Neighboring gene uncharacterized LOC120517932

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053170.1 Chromosome 17 Reference ASM1683550v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables galactokinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in galactose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    galactokinase
    Names
    GALK1 Galactokinase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Polypterus senegalus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1683550v1 Primary Assembly

    Genomic

    1. NC_053170.1 Reference ASM1683550v1 Primary Assembly

      Range
      90823176..90853108
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039739267.1 → XP_039595201.1  galactokinase

      UniProtKB/TrEMBL
      A0A8X8BNN9
      Related
      ENSSTSP00000059253.1, ENSSTST00000068007.1
      Conserved Domains (1) summary
      PRK05101
      Location:12 → 391
      PRK05101; galactokinase; Provisional

    2. XM_039739265.1 → XP_039595199.1  galactokinase

      UniProtKB/TrEMBL
      A0A8X8BNN9
      Related
      ENSSTSP00000059252.1, ENSSTST00000068006.1
      Conserved Domains (1) summary
      PRK05101
      Location:12 → 391
      PRK05101; galactokinase; Provisional

    3. XM_039739266.1 → XP_039595200.1  galactokinase

      UniProtKB/TrEMBL
      A0A8X8BNN9
      Conserved Domains (1) summary
      PRK05101
      Location:12 → 391
      PRK05101; galactokinase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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