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    ctbp2l C-terminal binding protein 2, like [ Pimephales promelas (fathead minnow) ]

    Gene ID: 120462565, updated on 21-Mar-2024

    Summary

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    Gene symbol
    ctbp2l
    Gene description
    C-terminal binding protein 2, like
    Locus tag
    F2P79_022343
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pimephales promelas
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Pimephales
    Orthologs
    zebrafish all
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    Genomic context

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    See ctbp2l in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current EPA_FHM_2.0 (GCF_016745375.1) Unplaced Scaffold NW_024121103.1 (1174158..1199756)

    NW_024121103.1Genomic Context describing neighboring genes Neighboring gene uroporphyrinogen III synthase Neighboring gene matrix metallopeptidase 21 Neighboring gene uncharacterized LOC120462606 Neighboring gene DPY30 domain containing 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024121103 Unplaced Scaffold Reference EPA_FHM_2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-terminal binding protein 2, like
    Names
    C-terminal-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pimephales promelas Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EPA_FHM_2.0 Primary Assembly

    Genomic

    1. NW_024121103.1 Reference EPA_FHM_2.0 Primary Assembly

      Range
      1174158..1199756
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039651163.1 → XP_039507097.1  C-terminal binding protein 2, like isoform X2

      Conserved Domains (1) summary
      cd05299
      Location:34 → 352
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    2. XM_039651155.1 → XP_039507089.1  C-terminal binding protein 2, like isoform X1

      Conserved Domains (2) summary
      cd05299
      Location:480 → 798
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
      pfam09606
      Location:266 → 418
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

    3. XM_039651170.1 → XP_039507104.1  C-terminal binding protein 2, like isoform X3

      Conserved Domains (1) summary
      cd05299
      Location:20 → 338
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
    Nucleotide Protein
    Heading Accession and Version

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