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    AMPD1 adenosine monophosphate deaminase 1 [ Crotalus tigris (Tiger rattlesnake) ]

    Gene ID: 120314143, updated on 21-Mar-2024

    Summary

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    Gene symbol
    AMPD1
    Gene description
    adenosine monophosphate deaminase 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Crotalus tigris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Crotalus
    Orthologs
    human mouse all
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    Genomic context

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    See AMPD1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current ASM1654583v1 (GCF_016545835.1) Unplaced Scaffold NW_024097227.1 (376394..394009, complement)

    NW_024097227.1Genomic Context describing neighboring genes Neighboring gene BCAS2 pre-mRNA processing factor Neighboring gene DENN domain containing 2C Neighboring gene NRAS proto-oncogene, GTPase Neighboring gene cold shock domain containing E1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024097227 Unplaced Scaffold Reference ASM1654583v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables AMP deaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in AMP metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in IMP salvage IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AMP deaminase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Crotalus tigris Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1654583v1

    Genomic

    1. NW_024097227.1 Reference ASM1654583v1

      Range
      376394..394009 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039356929.1 → XP_039212863.1  AMP deaminase 1

      Conserved Domains (1) summary
      cd01319
      Location:234 → 730
      AMPD; AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
    Nucleotide Protein
    Heading Accession and Version

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