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    B0310.2 C2H2-type domain-containing protein;Putative zinc finger protein B0310.2 [ Caenorhabditis elegans ]

    Gene ID: 180403, updated on 2-Nov-2024

    Summary

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    Official Symbol
    B0310.2
    Official Full Name
    C2H2-type domain-containing protein;Putative zinc finger protein B0310.2
    Primary source
    WormBase:WBGene00015138
    Locus tag
    CELE_B0310.2
    See related
    AllianceGenome:WB:WBGene00015138
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA binding activity and metal ion binding activity. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See B0310.2 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    7
    Sequence:
    Chromosome: X; NC_003284.9 (501946..506948, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    C2H2-type domain-containing protein;Putative zinc finger protein B0310.2
    NP_001348780.1
    • Confirmed by transcript evidence
    NP_508109.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      501946..506948 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001361780.4 → NP_001348780.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A2K5ATZ8
      Conserved Domains (2) summary
      sd00017
      Location:245 → 267
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:260 → 284
      zf-H2C2_2; Zinc-finger double domain

    2. NM_075708.7 → NP_508109.1  Putative zinc finger protein B0310.2 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_508109.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q10938
      Conserved Domains (2) summary
      sd00017
      Location:308 → 330
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:323 → 347
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q10938.1

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