U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    KRT77 keratin 77 [ Canis lupus familiaris (dog) ]

    Gene ID: 100683333, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    KRT77
    Gene description
    keratin 77
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See KRT77 in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (2399788..2413636)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (43840171..43853691, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (44238610..44252170, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (2416266..2430027)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (2401213..2415050)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene keratin 127 Neighboring gene keratin, type II cytoskeletal 3-like Neighboring gene keratin 1 Neighboring gene keratin 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of skin epidermis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intermediate filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in keratinization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in keratin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    keratin, type II cytoskeletal 1b

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      2399788..2413636
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038438105.1 → XP_038294033.1  keratin, type II cytoskeletal 1b isoform X1

      UniProtKB/TrEMBL
      A0A8C0TJK6
      Conserved Domains (2) summary
      pfam00038
      Location:175 → 488
      Filament; Intermediate filament protein
      pfam16208
      Location:61 → 172
      Keratin_2_head; Keratin type II head

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049287.1 Alternate UMICH_Zoey_3.1

      Range
      2416266..2430027
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038512797.1 → XP_038368725.1  keratin, type II cytoskeletal 1b isoform X1

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      2401213..2415050
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038640560.1 → XP_038496488.1  keratin, type II cytoskeletal 1b isoform X1

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      44238610..44252170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038577741.1 → XP_038433669.1  keratin, type II cytoskeletal 1b isoform X1

      UniProtKB/TrEMBL
      A0A8C0LBX1

    2. XM_038577742.1 → XP_038433670.1  keratin, type II cytoskeletal 1b isoform X2

      UniProtKB/TrEMBL
      A0A8C0TJK6

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      43840171..43853691 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038460142.1 → XP_038316070.1  keratin, type II cytoskeletal 1b isoform X3

      UniProtKB/TrEMBL
      A0A8C0TJK6
      Conserved Domains (2) summary
      pfam00038
      Location:175 → 488
      Filament; Intermediate filament protein
      pfam16208
      Location:61 → 172
      Keratin_2_head; Keratin type II head

    2. XM_038460141.1 → XP_038316069.1  keratin, type II cytoskeletal 1b isoform X1

      UniProtKB/TrEMBL
      A0A8C0LBX1, A0A8P0TIA1
      Conserved Domains (2) summary
      pfam00038
      Location:175 → 488
      Filament; Intermediate filament protein
      pfam16208
      Location:61 → 172
      Keratin_2_head; Keratin type II head
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials