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    VPS13B vacuolar protein sorting 13 homolog B [ Canis lupus familiaris (dog) ]

    Gene ID: 481981, updated on 17-Aug-2024

    Summary

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    Official Symbol
    VPS13Bprovided by VGNC
    Official Full Name
    vacuolar protein sorting 13 homolog Bprovided by VGNC
    Primary source
    VGNC:VGNC:48275
    See related
    Ensembl:ENSCAFG00845025516
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See VPS13B in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    69
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (1253509..1988060)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (1096682..1830492)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (1210806..1944933)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (1096002..1830212)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (1203819..1943474)

    Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119865383 Neighboring gene uncharacterized LOC111098490 Neighboring gene U2 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC119865384 Neighboring gene microRNA mir-599 Neighboring gene microRNA mir-875 Neighboring gene proline-rich protein 3-like Neighboring gene cytochrome c oxidase subunit 6C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    vacuolar protein sorting-associated protein 13B
    Names
    vesicle protein sorting 13 B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051817.1 Reference ROS_Cfam_1.0

      Range
      1253509..1988060
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038684683.1 → XP_038540611.1  vacuolar protein sorting-associated protein 13B isoform X7

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    2. XM_038684682.1 → XP_038540610.1  vacuolar protein sorting-associated protein 13B isoform X6

      UniProtKB/TrEMBL
      A0A8C0N9T5
      Conserved Domains (2) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    3. XM_038684684.1 → XP_038540612.1  vacuolar protein sorting-associated protein 13B isoform X8

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    4. XM_038684685.1 → XP_038540613.1  vacuolar protein sorting-associated protein 13B isoform X9

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    5. XM_038684686.1 → XP_038540614.1  vacuolar protein sorting-associated protein 13B isoform X10

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    6. XM_038684687.1 → XP_038540615.1  vacuolar protein sorting-associated protein 13B isoform X11

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    7. XM_038684676.1 → XP_038540604.1  vacuolar protein sorting-associated protein 13B isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJG9, A0A8I3PR92
      Conserved Domains (4) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3741 → 3834
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3582 → 3728
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    8. XM_038684677.1 → XP_038540605.1  vacuolar protein sorting-associated protein 13B isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJG9, A0A8I3PR92
      Related
      ENSCAFP00845035390.1, ENSCAFT00845045136.1
      Conserved Domains (4) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3741 → 3834
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3582 → 3728
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    9. XM_038684679.1 → XP_038540607.1  vacuolar protein sorting-associated protein 13B isoform X3

      UniProtKB/TrEMBL
      A0A8C0RJG9
      Conserved Domains (4) summary
      pfam06650
      Location:2627 → 2819
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3740 → 3833
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3581 → 3727
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    10. XM_038684678.1 → XP_038540606.1  vacuolar protein sorting-associated protein 13B isoform X2

      UniProtKB/TrEMBL
      A0A8C0RJG9
      Conserved Domains (4) summary
      pfam06650
      Location:2627 → 2819
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3740 → 3833
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3581 → 3727
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    11. XM_038684681.1 → XP_038540609.1  vacuolar protein sorting-associated protein 13B isoform X5

      UniProtKB/TrEMBL
      A0A8C0NCH4
      Conserved Domains (4) summary
      pfam06650
      Location:2580 → 2772
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3693 → 3786
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 49
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3534 → 3680
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    12. XM_038684680.1 → XP_038540608.1  vacuolar protein sorting-associated protein 13B isoform X4

      UniProtKB/TrEMBL
      A0A8C0N699, A0A8I3Q867
      Related
      ENSCAFP00845035847.1, ENSCAFT00845045682.1
      Conserved Domains (4) summary
      pfam06650
      Location:2603 → 2795
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3716 → 3809
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3557 → 3703
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    13. XM_038684675.1 → XP_038540603.1  vacuolar protein sorting-associated protein 13B isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJG9, A0A8I3PR92
      Conserved Domains (4) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3741 → 3834
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3582 → 3728
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    RNA

    1. XR_005436190.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049273.1 Alternate UMICH_Zoey_3.1

      Range
      1096002..1830212
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038492901.1 → XP_038348829.1  vacuolar protein sorting-associated protein 13B isoform X7

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    2. XM_038492900.1 → XP_038348828.1  vacuolar protein sorting-associated protein 13B isoform X6

      Conserved Domains (2) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    3. XM_038492902.1 → XP_038348830.1  vacuolar protein sorting-associated protein 13B isoform X8

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    4. XM_038492903.1 → XP_038348831.1  vacuolar protein sorting-associated protein 13B isoform X9

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    5. XM_038492904.1 → XP_038348832.1  vacuolar protein sorting-associated protein 13B isoform X10

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    6. XM_038492905.1 → XP_038348833.1  vacuolar protein sorting-associated protein 13B isoform X11

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    7. XM_038492894.1 → XP_038348822.1  vacuolar protein sorting-associated protein 13B isoform X1

      Conserved Domains (4) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3741 → 3834
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3582 → 3728
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    8. XM_038492895.1 → XP_038348823.1  vacuolar protein sorting-associated protein 13B isoform X1

      Conserved Domains (4) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3741 → 3834
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3582 → 3728
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    9. XM_038492897.1 → XP_038348825.1  vacuolar protein sorting-associated protein 13B isoform X3

      Conserved Domains (4) summary
      pfam06650
      Location:2627 → 2819
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3740 → 3833
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3581 → 3727
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    10. XM_038492896.1 → XP_038348824.1  vacuolar protein sorting-associated protein 13B isoform X2

      Conserved Domains (4) summary
      pfam06650
      Location:2627 → 2819
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3740 → 3833
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3581 → 3727
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    11. XM_038492899.1 → XP_038348827.1  vacuolar protein sorting-associated protein 13B isoform X5

      Conserved Domains (4) summary
      pfam06650
      Location:2580 → 2772
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3693 → 3786
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 49
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3534 → 3680
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    12. XM_038492898.1 → XP_038348826.1  vacuolar protein sorting-associated protein 13B isoform X4

      Conserved Domains (4) summary
      pfam06650
      Location:2603 → 2795
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3716 → 3809
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3557 → 3703
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    13. XM_038492893.1 → XP_038348821.1  vacuolar protein sorting-associated protein 13B isoform X1

      Conserved Domains (4) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3741 → 3834
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3582 → 3728
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    RNA

    1. XR_005334691.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

      Range
      1203819..1943474
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038619061.1 → XP_038474989.1  vacuolar protein sorting-associated protein 13B isoform X7

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    2. XM_038619060.1 → XP_038474988.1  vacuolar protein sorting-associated protein 13B isoform X6

    3. XM_038619062.1 → XP_038474990.1  vacuolar protein sorting-associated protein 13B isoform X8

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    4. XM_038619063.1 → XP_038474991.1  vacuolar protein sorting-associated protein 13B isoform X9

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    5. XM_038619064.1 → XP_038474992.1  vacuolar protein sorting-associated protein 13B isoform X10

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    6. XM_038619065.1 → XP_038474993.1  vacuolar protein sorting-associated protein 13B isoform X11

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    7. XM_038619054.1 → XP_038474982.1  vacuolar protein sorting-associated protein 13B isoform X1

    8. XM_038619055.1 → XP_038474983.1  vacuolar protein sorting-associated protein 13B isoform X1

    9. XM_038619057.1 → XP_038474985.1  vacuolar protein sorting-associated protein 13B isoform X3

    10. XM_038619056.1 → XP_038474984.1  vacuolar protein sorting-associated protein 13B isoform X2

    11. XM_038619059.1 → XP_038474987.1  vacuolar protein sorting-associated protein 13B isoform X5

    12. XM_038619058.1 → XP_038474986.1  vacuolar protein sorting-associated protein 13B isoform X4

    13. XM_038619053.1 → XP_038474981.1  vacuolar protein sorting-associated protein 13B isoform X1

    RNA

    1. XR_005402741.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

      Range
      1210806..1944933
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038555171.1 → XP_038411099.1  vacuolar protein sorting-associated protein 13B isoform X7

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    2. XM_038555170.1 → XP_038411098.1  vacuolar protein sorting-associated protein 13B isoform X6

      UniProtKB/TrEMBL
      A0A8C0N9T5
      Conserved Domains (2) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    3. XM_038555172.1 → XP_038411100.1  vacuolar protein sorting-associated protein 13B isoform X8

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    4. XM_038555173.1 → XP_038411101.1  vacuolar protein sorting-associated protein 13B isoform X9

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    5. XM_038555174.1 → XP_038411102.1  vacuolar protein sorting-associated protein 13B isoform X10

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    6. XM_038555175.1 → XP_038411103.1  vacuolar protein sorting-associated protein 13B isoform X11

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    7. XM_038555164.1 → XP_038411092.1  vacuolar protein sorting-associated protein 13B isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJG9, A0A8C0SL38, A0A8P0N3S8
      Conserved Domains (4) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3741 → 3834
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3582 → 3728
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    8. XM_038555165.1 → XP_038411093.1  vacuolar protein sorting-associated protein 13B isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJG9, A0A8C0SL38, A0A8P0N3S8
      Conserved Domains (4) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3741 → 3834
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3582 → 3728
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    9. XM_038555167.1 → XP_038411095.1  vacuolar protein sorting-associated protein 13B isoform X3

      UniProtKB/TrEMBL
      A0A8C0RJG9
      Conserved Domains (4) summary
      pfam06650
      Location:2627 → 2819
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3740 → 3833
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3581 → 3727
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    10. XM_038555166.1 → XP_038411094.1  vacuolar protein sorting-associated protein 13B isoform X2

      UniProtKB/TrEMBL
      A0A8C0RJG9
      Conserved Domains (4) summary
      pfam06650
      Location:2627 → 2819
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3740 → 3833
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3581 → 3727
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    11. XM_038555169.1 → XP_038411097.1  vacuolar protein sorting-associated protein 13B isoform X5

      UniProtKB/TrEMBL
      A0A8C0NCH4, A0A8C0YYC8
      Conserved Domains (4) summary
      pfam06650
      Location:2580 → 2772
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3693 → 3786
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 49
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3534 → 3680
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    12. XM_038555168.1 → XP_038411096.1  vacuolar protein sorting-associated protein 13B isoform X4

      UniProtKB/TrEMBL
      A0A8C0N699, A0A8C0SJH2, A0A8P0TEZ0
      Conserved Domains (4) summary
      pfam06650
      Location:2603 → 2795
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3716 → 3809
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3557 → 3703
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    13. XM_038555163.1 → XP_038411091.1  vacuolar protein sorting-associated protein 13B isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJG9, A0A8C0SL38, A0A8P0N3S8
      Conserved Domains (4) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3741 → 3834
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3582 → 3728
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    RNA

    1. XR_005368417.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      1096682..1830492
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022426560.2 → XP_022282268.1  vacuolar protein sorting-associated protein 13B isoform X7

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    2. XM_038432176.1 → XP_038288104.1  vacuolar protein sorting-associated protein 13B isoform X6

      UniProtKB/TrEMBL
      A0A8C0N9T5
      Conserved Domains (2) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    3. XM_038432192.1 → XP_038288120.1  vacuolar protein sorting-associated protein 13B isoform X8

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    4. XM_038432194.1 → XP_038288122.1  vacuolar protein sorting-associated protein 13B isoform X9

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    5. XM_005627823.4 → XP_005627880.1  vacuolar protein sorting-associated protein 13B isoform X10

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    6. XM_022426562.2 → XP_022282270.1  vacuolar protein sorting-associated protein 13B isoform X11

      Conserved Domains (1) summary
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13

    7. XM_038432159.1 → XP_038288087.1  vacuolar protein sorting-associated protein 13B isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJG9, A0A8C0SL38, A0A8P0N3S8
      Conserved Domains (4) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3741 → 3834
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3582 → 3728
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    8. XM_539102.8 → XP_539102.3  vacuolar protein sorting-associated protein 13B isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJG9, A0A8C0SL38, A0A8P0N3S8
      Conserved Domains (4) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3741 → 3834
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3582 → 3728
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    9. XM_005627820.4 → XP_005627877.2  vacuolar protein sorting-associated protein 13B isoform X3

      UniProtKB/TrEMBL
      A0A8C0RJG9
      Conserved Domains (4) summary
      pfam06650
      Location:2627 → 2819
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3740 → 3833
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3581 → 3727
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    10. XM_005627819.4 → XP_005627876.2  vacuolar protein sorting-associated protein 13B isoform X2

      UniProtKB/TrEMBL
      A0A8C0RJG9
      Conserved Domains (4) summary
      pfam06650
      Location:2627 → 2819
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3740 → 3833
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3581 → 3727
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    11. XM_022426558.2 → XP_022282266.2  vacuolar protein sorting-associated protein 13B isoform X5

      UniProtKB/TrEMBL
      A0A8C0NCH4, A0A8C0YYC8
      Conserved Domains (4) summary
      pfam06650
      Location:2580 → 2772
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3693 → 3786
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 49
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3534 → 3680
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    12. XM_850840.7 → XP_855933.2  vacuolar protein sorting-associated protein 13B isoform X4

      UniProtKB/TrEMBL
      A0A8C0N699, A0A8C0SJH2, A0A8P0TEZ0
      Conserved Domains (4) summary
      pfam06650
      Location:2603 → 2795
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3716 → 3809
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3557 → 3703
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    13. XM_014118535.3 → XP_013974010.2  vacuolar protein sorting-associated protein 13B isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJG9, A0A8C0SL38, A0A8P0N3S8
      Conserved Domains (4) summary
      pfam06650
      Location:2628 → 2820
      SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
      pfam09333
      Location:3741 → 3834
      ATG_C; Autophagy-related protein C terminal domain
      pfam12624
      Location:6 → 94
      Chorein_N; N-terminal region of Chorein or VPS13
      pfam16909
      Location:3582 → 3728
      VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal

    RNA

    1. XR_002632293.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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