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    LOC119891673 VIP36-like protein [ Micropterus salmoides (largemouth bass) ]

    Gene ID: 119891673, updated on 19-Jun-2024

    Summary

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    Gene symbol
    LOC119891673
    Gene description
    VIP36-like protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Micropterus salmoides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Centrarchidae; Micropterus
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    Genomic context

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    See LOC119891673 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current ASM1485139v1 (GCF_014851395.1) Unplaced Scaffold NW_024044459.1 (4822681..4831147, complement)

    NW_024044459.1Genomic Context describing neighboring genes Neighboring gene NMDA receptor synaptonuclear signaling and neuronal migration factor b Neighboring gene putative uncharacterized protein MYH16 Neighboring gene uncharacterized LOC119891152 Neighboring gene T-box transcription factor 3b

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024044459 Unplaced Scaffold Reference ASM1485139v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables D-mannose binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in COPII-coated ER to Golgi transport vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum-Golgi intermediate compartment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    VIP36-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Micropterus salmoides Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1485139v1 Primary Assembly

    Genomic

    1. NW_024044459.1 Reference ASM1485139v1 Primary Assembly

      Range
      4822681..4831147 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038703476.1 → XP_038559404.1  VIP36-like protein isoform X1

      Conserved Domains (1) summary
      cl14058
      Location:56 → 303
      lectin_L-type; legume lectins

    2. XM_038703477.1 → XP_038559405.1  VIP36-like protein isoform X2

      Conserved Domains (1) summary
      cl14058
      Location:2 → 223
      lectin_L-type; legume lectins
    Nucleotide Protein
    Heading Accession and Version

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