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    LOC119833449 delta-sarcoglycan-like [ Zerene cesonia (dogface butterfly) ]

    Gene ID: 119833449, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC119833449
    Gene description
    delta-sarcoglycan-like
    See related
    EnsemblRapid:ENSZCEG00000012806
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zerene cesonia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Pieridae; Coliadinae; Zerene
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    Genomic context

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    See LOC119833449 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current Zerene_cesonia_1.1 (GCF_012273895.1) 17 NC_052118.1 (6301677..6306552)

    Chromosome 17 - NC_052118.1Genomic Context describing neighboring genes Neighboring gene uncharacterized oxidoreductase YrbE-like Neighboring gene uncharacterized oxidoreductase YrbE-like Neighboring gene delta-sarcoglycan-like Neighboring gene uncharacterized LOC119833647

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052118.1 Chromosome 17 Reference Zerene_cesonia_1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cardiac muscle tissue development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in heart contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of sarcoglycan complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sarcolemma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    delta-sarcoglycan-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zerene cesonia Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zerene_cesonia_1.1

    Genomic

    1. NC_052118.1 Reference Zerene_cesonia_1.1

      Range
      6301677..6306552
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038357452.1 → XP_038213380.1  delta-sarcoglycan-like isoform X1

      Related
      ENSZCEP00000019129.1, ENSZCET00000021102.1
      Conserved Domains (1) summary
      pfam04790
      Location:45 → 297
      Sarcoglycan_1; Sarcoglycan complex subunit protein

    2. XM_038357454.1 → XP_038213382.1  delta-sarcoglycan-like isoform X2

      Conserved Domains (1) summary
      pfam04790
      Location:45 → 271
      Sarcoglycan_1; Sarcoglycan complex subunit protein

    3. XM_038357453.1 → XP_038213381.1  delta-sarcoglycan-like isoform X1

      Related
      ENSZCEP00000019124.1, ENSZCET00000021095.1
      Conserved Domains (1) summary
      pfam04790
      Location:45 → 297
      Sarcoglycan_1; Sarcoglycan complex subunit protein
    Nucleotide Protein
    Heading Accession and Version

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