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    Rpt2 26S proteasome regulatory subunit Rpt2 [ Culex quinquefasciatus (southern house mosquito) ]

    Gene ID: 6044345, updated on 16-May-2024

    Summary

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    Gene symbol
    Rpt2
    Gene description
    26S proteasome regulatory subunit Rpt2
    See related
    VectorBase:CQUJHB012793; EnsemblRapid:LOC6044345
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Culex quinquefasciatus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
    Orthologs
    fruit fly all
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    Genomic context

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    See Rpt2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current VPISU_Cqui_1.0_pri_paternal (GCF_015732765.1) 1 NC_051861.1 (131224057..131225868, complement)

    Chromosome 1 - NC_051861.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 35 Neighboring gene Dynein axonemal assembly factor 4 Neighboring gene probable cytosolic oligopeptidase A Neighboring gene uncharacterized LOC6044344

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_051861.1 Chromosome 1 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables proteasome-activating activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proteasome regulatory particle, base subcomplex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    26S proteasome regulatory subunit 4
    Names
    26S protease regulatory subunit 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Culex quinquefasciatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

    Genomic

    1. NC_051861.1 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

      Range
      131224057..131225868 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001861840.2 → XP_001861875.1  26S proteasome regulatory subunit 4

      See identical proteins and their annotated locations for XP_001861875.1

      UniProtKB/TrEMBL
      B0WWV3
      Related
      XP_001861875.1, XM_001861840.2
      Conserved Domains (1) summary
      PTZ00361
      Location:1 → 438
      PTZ00361; 26 proteosome regulatory subunit 4-like protein; Provisional
    Nucleotide Protein Strain
    Heading Accession and Version

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