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    mgat4b alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [ Nematolebias whitei (Rio pearlfish) ]

    Gene ID: 119408384, updated on 21-Mar-2024

    Summary

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    Gene symbol
    mgat4b
    Gene description
    alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nematolebias whitei
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Nematolebias
    Orthologs
    human zebrafish all
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    Genomic context

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    See mgat4b in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100.20210725 current NemWhi1 (GCF_014905685.2) 4 NC_056501.1 (9208994..9279116)
    100 previous assembly NemWhi1 (GCF_014905685.1) Unplaced Scaffold NW_023618549.1 (9208994..9279116)

    Chromosome 4 - NC_056501.1Genomic Context describing neighboring genes Neighboring gene nuclear factor NF-kappa-B p105 subunit-like Neighboring gene diacylglycerol kinase theta Neighboring gene calnexin Neighboring gene mastermind-like transcriptional coactivator 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acetylglucosaminyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein N-linked glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi stack IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum-Golgi intermediate compartment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nematolebias whitei Updated Annotation Release 100.20210725

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NemWhi1

    Genomic

    1. NC_056501.1 Reference NemWhi1

      Range
      9208994..9279116
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037675190.1 → XP_037531118.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B

      Conserved Domains (1) summary
      pfam04666
      Location:109 → 386
      Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
    Nucleotide Protein
    Heading Accession and Version

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