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    LOC105643105 probable calcium-binding protein CML27 [ Jatropha curcas ]

    Gene ID: 105643105, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC105643105
    Gene description
    probable calcium-binding protein CML27
    Locus tag
    JCGZ_14512
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Jatropha curcas
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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    Genomic context

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    See LOC105643105 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current RJC1_Hi-C (GCF_014843425.1) Unplaced Scaffold NW_023590928.1 (273704..274638, complement)
    101 previous assembly JatCur_1.0 (GCF_000696525.1) Unplaced Scaffold NW_012124637.1 (3695801..3696720, complement)

    NW_023590928.1Genomic Context describing neighboring genes Neighboring gene kinesin-like protein KIN-UB Neighboring gene AT-hook motif nuclear-localized protein 22 Neighboring gene brefeldin A-inhibited guanine nucleotide-exchange protein 2 Neighboring gene pentatricopeptide repeat-containing protein At1g01970 Neighboring gene transfer RNA glutamic acid (anticodon CUC)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable calcium-binding protein CML27

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Jatropha curcas Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference RJC1_Hi-C Primary Assembly

    Genomic

    1. NW_023590928.1 Reference RJC1_Hi-C Primary Assembly

      Range
      273704..274638 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012228167.3 → XP_012083557.1  probable calcium-binding protein CML27

      See identical proteins and their annotated locations for XP_012083557.1

      UniProtKB/TrEMBL
      A0A067JXS4
      Conserved Domains (2) summary
      PTZ00184
      Location:48 → 184
      PTZ00184; calmodulin; Provisional
      cd00051
      Location:119 → 182
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    Nucleotide Protein
    Heading Accession and Version

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