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    LOC100274681 uncharacterized LOC100274681 [ Zea mays ]

    Gene ID: 100274681, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC100274681
    Gene description
    uncharacterized LOC100274681
    Locus tag
    ZEAMMB73_Zm00001d023311
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    cl10136_1; GRMZM2G356817; GRMZM2G356839
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    Genomic context

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    See LOC100274681 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 10 NC_050105.1 (2701230..2715391)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 10 NC_024468.2 (2740814..2754349)

    Chromosome 10 - NC_050105.1Genomic Context describing neighboring genes Neighboring gene putative cytochrome P450 superfamily protein Neighboring gene uncharacterized LOC109943114 Neighboring gene vegetative cell wall protein gp1-like Neighboring gene uncharacterized LOC103640699 Neighboring gene uncharacterized LOC103640701 Neighboring gene glutathione S-transferase T3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
    2. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ADP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response to other organism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative disease resistance RPP13-like protein 1; uncharacterized protein LOC100382550
    Names
    cl10136_1(712)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050105.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      2701230..2715391
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035963291.1 → XP_035819184.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    2. XM_035963289.1 → XP_035819182.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    3. XM_020545635.2 → XP_020401224.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    4. XM_008664178.3 → XP_008662400.2  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    5. XM_035963292.1 → XP_035819185.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    6. XM_020545627.2 → XP_020401216.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    7. XM_020545632.2 → XP_020401221.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    8. XM_035963288.1 → XP_035819181.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    9. XM_035963293.1 → XP_035819186.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    10. XM_020545634.2 → XP_020401223.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    11. XM_035963287.1 → XP_035819180.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    12. XM_035963290.1 → XP_035819183.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    13. XM_020545633.2 → XP_020401222.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    14. XM_020545626.2 → XP_020401215.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    15. XM_020545629.2 → XP_020401218.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    16. XM_020545631.2 → XP_020401220.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    17. XM_035963294.1 → XP_035819187.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    18. XM_020545628.2 → XP_020401217.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    19. XM_035963295.1 → XP_035819188.1  putative disease resistance RPP13-like protein 1

      UniProtKB/TrEMBL
      A0A804R8K0
      Conserved Domains (1) summary
      pfam00931
      Location:227 → 477
      NB-ARC; NB-ARC domain

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001175284.1: Suppressed sequence

      Description
      NM_001175284.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein
    Heading Accession and Version

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