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    L2HGDH L-2-hydroxyglutarate dehydrogenase [ Egretta garzetta (little egret) ]

    Gene ID: 104135009, updated on 3-Aug-2024

    Summary

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    Gene symbol
    L2HGDH
    Gene description
    L-2-hydroxyglutarate dehydrogenase
    Locus tag
    Z169_04351
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Egretta garzetta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See L2HGDH in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009258668.1 (1527643..1543328, complement)

    NW_009258668.1Genomic Context describing neighboring genes Neighboring gene valosin containing protein lysine methyltransferase Neighboring gene SOS Ras/Rho guanine nucleotide exchange factor 2 Neighboring gene distal membrane arm assembly component 2 like Neighboring gene cyclin dependent kinase like 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009258668 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables (S)-2-hydroxy-acid oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables 2-hydroxyglutarate dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    L-2-hydroxyglutarate dehydrogenase, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM68718v1 Primary Assembly

    Genomic

    1. NW_009258668.1 Reference ASM68718v1 Primary Assembly

      Range
      1527643..1543328 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009648614.2 → XP_009646909.1  L-2-hydroxyglutarate dehydrogenase, mitochondrial

      See identical proteins and their annotated locations for XP_009646909.1

      UniProtKB/TrEMBL
      A0A091IU33
      Conserved Domains (2) summary
      PRK11728
      Location:6 → 386
      PRK11728; hydroxyglutarate oxidase; Provisional
      cl21454
      Location:64 → 389
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version

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