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    SLC35F6 solute carrier family 35 member F6 [ Zalophus californianus (California sea lion) ]

    Gene ID: 113938003, updated on 15-Mar-2024

    Summary

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    Gene symbol
    SLC35F6
    Gene description
    solute carrier family 35 member F6
    See related
    EnsemblRapid:ENSZCAG00025010083
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zalophus californianus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC35F6 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current mZalCal1.pri.v2 (GCF_009762305.2) 8 NC_045602.1 (21946963..21963056)
    100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020875357.1 (21618876..21634969)

    Chromosome 8 - NC_045602.1Genomic Context describing neighboring genes Neighboring gene chloride intracellular channel protein 1-like Neighboring gene potassium two pore domain channel subfamily K member 3 Neighboring gene centromere protein A Neighboring gene transfer RNA lysine (anticodon UUU)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    solute carrier family 35 member F6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mZalCal1.pri.v2 Primary Assembly

    Genomic

    1. NC_045602.1 Reference mZalCal1.pri.v2 Primary Assembly

      Range
      21946963..21963056
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027623073.2 → XP_027478874.1  solute carrier family 35 member F6

      UniProtKB/TrEMBL
      A0A6J2FCI7
      Related
      ENSZCAP00025015766.1, ENSZCAT00025017898.1
      Conserved Domains (2) summary
      COG0697
      Location:44 → 340
      RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
      pfam06027
      Location:95 → 222
      SLC35F; Solute carrier family 35
    Nucleotide Protein
    Heading Accession and Version

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