U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    DENND2A DENN domain containing 2A [ Lacerta agilis ]

    Gene ID: 117054434, updated on 19-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    DENND2A
    Gene description
    DENN domain containing 2A
    See related
    EnsemblRapid:ENSLAGG00000017894
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lacerta agilis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Lacerta
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See DENND2A in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    100 current rLacAgi1.pri (GCF_009819535.1) 10 NC_046321.1 (20673248..20738066)

    Chromosome 10 - NC_046321.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117054114 Neighboring gene NADH:ubiquinone oxidoreductase subunit B2 Neighboring gene aarF domain containing kinase 2 Neighboring gene pseudouridine-metabolizing bifunctional protein C1861.05-like Neighboring gene makorin ring finger protein 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_046321.1 Chromosome 10 Reference rLacAgi1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in retrograde transport, endosome to Golgi IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    DENN domain-containing protein 2A

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Lacerta agilis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rLacAgi1.pri Primary Assembly

    Genomic

    1. NC_046321.1 Reference rLacAgi1.pri Primary Assembly

      Range
      20673248..20738066
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033163245.1 → XP_033019136.1  DENN domain-containing protein 2A isoform X1

      Conserved Domains (3) summary
      smart00801
      Location:994 → 1060
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:658 → 753
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:760 → 919
      DENN; DENN (AEX-3) domain

    2. XM_033163249.1 → XP_033019140.1  DENN domain-containing protein 2A isoform X4

      Conserved Domains (3) summary
      smart00801
      Location:991 → 1057
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:658 → 750
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:757 → 916
      DENN; DENN (AEX-3) domain

    3. XM_033163248.1 → XP_033019139.1  DENN domain-containing protein 2A isoform X3

      Conserved Domains (3) summary
      smart00801
      Location:992 → 1058
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:656 → 751
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:758 → 917
      DENN; DENN (AEX-3) domain

    4. XM_033163252.1 → XP_033019143.1  DENN domain-containing protein 2A isoform X7

      Conserved Domains (3) summary
      smart00801
      Location:989 → 1055
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:656 → 748
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:755 → 914
      DENN; DENN (AEX-3) domain

    5. XM_033163246.1 → XP_033019137.1  DENN domain-containing protein 2A isoform X2

      Conserved Domains (3) summary
      smart00801
      Location:993 → 1059
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:657 → 752
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:759 → 918
      DENN; DENN (AEX-3) domain

    6. XM_033163251.1 → XP_033019142.1  DENN domain-containing protein 2A isoform X6

      Related
      ENSLAGP00000024828.1, ENSLAGT00000026638.1
      Conserved Domains (3) summary
      smart00801
      Location:990 → 1056
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:657 → 749
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:756 → 915
      DENN; DENN (AEX-3) domain

    7. XM_033163250.1 → XP_033019141.1  DENN domain-containing protein 2A isoform X5

      Conserved Domains (3) summary
      smart00801
      Location:991 → 1057
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:655 → 750
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:757 → 916
      DENN; DENN (AEX-3) domain

    8. XM_033163253.1 → XP_033019144.1  DENN domain-containing protein 2A isoform X8

      Conserved Domains (3) summary
      smart00801
      Location:988 → 1054
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:655 → 747
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      pfam02141
      Location:754 → 913
      DENN; DENN (AEX-3) domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.