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    RAP1B RAP1B, member of RAS oncogene family [ Lacerta agilis ]

    Gene ID: 117054431, updated on 19-Mar-2024

    Summary

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    Gene symbol
    RAP1B
    Gene description
    RAP1B, member of RAS oncogene family
    See related
    EnsemblRapid:ENSLAGG00000014178
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lacerta agilis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Lacerta
    Orthologs
    human mouse all
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    Genomic context

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    See RAP1B in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current rLacAgi1.pri (GCF_009819535.1) 10 NC_046321.1 (43184342..43212647, complement)

    Chromosome 10 - NC_046321.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member E3 Neighboring gene uncharacterized LOC117053707 Neighboring gene nucleoporin 107 Neighboring gene uncharacterized LOC117054405 Neighboring gene Mdm1 nuclear protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046321.1 Chromosome 10 Reference rLacAgi1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GDP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Rap protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to cAMP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of synaptic vesicle exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rap-1b

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lacerta agilis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rLacAgi1.pri Primary Assembly

    Genomic

    1. NC_046321.1 Reference rLacAgi1.pri Primary Assembly

      Range
      43184342..43212647 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033163243.1 → XP_033019134.1  ras-related protein Rap-1b isoform X2

      Conserved Domains (1) summary
      cl38936
      Location:2 → 126
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    2. XM_033163241.1 → XP_033019132.1  ras-related protein Rap-1b isoform X1

      Conserved Domains (1) summary
      cd04175
      Location:3 → 167
      Rap1; Rap1 family GTPase consists of Rap1a and Rap1b isoforms

    3. XM_033163242.1 → XP_033019133.1  ras-related protein Rap-1b isoform X1

      Related
      ENSLAGP00000018725.1, ENSLAGT00000020359.1
      Conserved Domains (1) summary
      cd04175
      Location:3 → 167
      Rap1; Rap1 family GTPase consists of Rap1a and Rap1b isoforms
    Nucleotide Protein
    Heading Accession and Version

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