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    tmed6 transmembrane p24 trafficking protein 6 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 496652, updated on 25-Apr-2024

    Summary

    Official Symbol
    tmed6provided by Xenbase
    Official Full Name
    transmembrane p24 trafficking protein 6provided by Xenbase
    Primary source
    Xenbase:XB-GENE-967876
    See related
    Ensembl:ENSXETG00000017856
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
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    Genomic context

    See tmed6 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (61096963..61102788)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (62246350..62251539, complement)

    Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene nuclear factor of activated T cells 5 Neighboring gene cytochrome b5 type B (outer mitochondrial membrane) Neighboring gene telomeric repeat binding factor 2 Neighboring gene NIP7, nucleolar pre-rRNA processing protein Neighboring gene component of oligomeric golgi complex 8

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    transmembrane emp24 domain-containing protein 6
    Names
    transmembrane emp24 protein transport domain containing 6

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001199601.2NP_001186530.1  transmembrane emp24 domain-containing protein 6 precursor

      See identical proteins and their annotated locations for NP_001186530.1

      Status: PROVISIONAL

      Source sequence(s)
      AAMC04000004
      UniProtKB/TrEMBL
      A0A7D9NLP5, Q5M8Y8
      Related
      ENSXETP00000038703.4, ENSXETT00000038703.5
      Conserved Domains (1) summary
      pfam01105
      Location:39224
      EMP24_GP25L; emp24/gp25L/p24 family/GOLD

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      61096963..61102788
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012960993.3XP_012816447.1  transmembrane emp24 domain-containing protein 6 isoform X1

      See identical proteins and their annotated locations for XP_012816447.1

      UniProtKB/TrEMBL
      A0A7D9NLP5, Q5M8Y8
      Conserved Domains (1) summary
      pfam01105
      Location:39224
      EMP24_GP25L; emp24/gp25L/p24 family/GOLD