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    LOC101209232 auxin-induced protein 22A [ Cucumis sativus (cucumber) ]

    Gene ID: 101209232, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101209232
    Gene description
    auxin-induced protein 22A
    Locus tag
    Csa_017652
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101209232 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 3 NC_026657.2 (22394684..22395356)
    101 previous assembly ASM407v2 (GCF_000004075.2) 3 NC_026657.1 (21480817..21481531, complement)

    Chromosome 3 - NC_026657.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101207532 Neighboring gene transfer RNA glutamine (anticodon UUG) Neighboring gene auxin-induced protein AUX22-like Neighboring gene uncharacterized LOC116402556

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    auxin-induced protein 22A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026657.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      22394684..22395356
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004149803.3 → XP_004149851.2  auxin-induced protein 22A

      See identical proteins and their annotated locations for XP_004149851.2

      UniProtKB/TrEMBL
      A0A0A0L852
      Conserved Domains (1) summary
      pfam02309
      Location:11 → 166
      AUX_IAA; AUX/IAA family
    Nucleotide Protein
    Heading Accession and Version

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