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    KPNA2 karyopherin subunit alpha 2 [ Strigops habroptila (Kakapo) ]

    Gene ID: 115616724, updated on 3-Aug-2024

    Summary

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    Gene symbol
    KPNA2
    Gene description
    karyopherin subunit alpha 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strigops habroptila
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
    Orthologs
    human mouse all
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    Genomic context

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    See KPNA2 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    101 current bStrHab1.2.pri (GCF_004027225.2) 14 NC_044290.2 (9166396..9174957, complement)
    100 previous assembly bStrHab1_v1.p (GCF_004027225.1) 15 NC_044291.1 (9166396..9174957, complement)

    Chromosome 14 - NC_044290.2Genomic Context describing neighboring genes Neighboring gene SMAD specific E3 ubiquitin protein ligase 2 Neighboring gene uncharacterized LOC115616732 Neighboring gene chromosome 14 C17orf58 homolog Neighboring gene transfer RNA arginine (anticodon CCG) Neighboring gene bromodomain PHD finger transcription factor Neighboring gene nucleolar protein 11

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nuclear import signal receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear localization sequence binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in NLS-bearing protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    importin subunit alpha-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Strigops habroptila Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bStrHab1.2.pri

    Genomic

    1. NC_044290.2 Reference bStrHab1.2.pri

      Range
      9166396..9174957 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030506370.1 → XP_030362230.1  importin subunit alpha-1 isoform X2

      UniProtKB/TrEMBL
      A0A672VFD3
      Conserved Domains (2) summary
      COG5064
      Location:10 → 529
      SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
      sd00043
      Location:115 → 147
      ARM; armadillo repeat [structural motif]

    2. XM_030506366.1 → XP_030362226.1  importin subunit alpha-1 isoform X1

      Conserved Domains (2) summary
      COG5064
      Location:84 → 603
      SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
      sd00043
      Location:189 → 221
      ARM; armadillo repeat [structural motif]

    3. XM_030506368.1 → XP_030362228.1  importin subunit alpha-1 isoform X2

      UniProtKB/TrEMBL
      A0A672VFD3
      Conserved Domains (2) summary
      COG5064
      Location:10 → 529
      SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
      sd00043
      Location:115 → 147
      ARM; armadillo repeat [structural motif]

    4. XM_030506369.1 → XP_030362229.1  importin subunit alpha-1 isoform X2

      UniProtKB/TrEMBL
      A0A672VFD3
      Conserved Domains (2) summary
      COG5064
      Location:10 → 529
      SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
      sd00043
      Location:115 → 147
      ARM; armadillo repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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