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    LOC115200186 eukaryotic translation initiation factor 4E-binding protein 2-like [ Salmo trutta (river trout) ]

    Gene ID: 115200186, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC115200186
    Gene description
    eukaryotic translation initiation factor 4E-binding protein 2-like
    See related
    Ensembl:ENSSTUG00000021063
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salmo trutta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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    Genomic context

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    See LOC115200186 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current fSalTru1.1 (GCF_901001165.1) 9 NC_042965.1 (22112244..22123279)

    Chromosome 9 - NC_042965.1Genomic Context describing neighboring genes Neighboring gene transcription factor COE2-like Neighboring gene ankyrin-1-like Neighboring gene U7 small nuclear RNA Neighboring gene nodal homolog 2-A-like Neighboring gene deoxyguanosine kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_042965.1 Chromosome 9 Reference fSalTru1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables eukaryotic initiation factor 4E binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of translational initiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 4E-binding protein 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSalTru1.1 Primary Assembly

    Genomic

    1. NC_042965.1 Reference fSalTru1.1 Primary Assembly

      Range
      22112244..22123279
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029763019.1 → XP_029618879.1  eukaryotic translation initiation factor 4E-binding protein 2-like

      UniProtKB/TrEMBL
      A0A673ZR44
      Related
      ENSSTUP00000049809.1, ENSSTUT00000052079.1
      Conserved Domains (1) summary
      pfam05456
      Location:10 → 119
      eIF_4EBP; Eukaryotic translation initiation factor 4E binding protein (EIF4EBP)
    Nucleotide Protein
    Heading Accession and Version

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