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    nfkbie nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon [ Cottoperca gobio ]

    Gene ID: 115003719, updated on 17-Mar-2024

    Summary

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    Gene symbol
    nfkbie
    Gene description
    nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
    See related
    Ensembl:ENSCGOG00000020055
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cottoperca gobio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Bovichtidae; Cottoperca
    Orthologs
    human zebrafish all
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    Genomic context

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    See nfkbie in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current fCotGob3.1 (GCF_900634415.1) 24 NC_041378.1 (5548882..5558212, complement)

    Chromosome 24 - NC_041378.1Genomic Context describing neighboring genes Neighboring gene heat shock protein 90, alpha (cytosolic), class B member 1 Neighboring gene solute carrier family 35 member B2 Neighboring gene transmembrane protein 151Ba Neighboring gene t-complex-associated-testis-expressed 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041378.1 Chromosome 24 Reference fCotGob3.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to lipopolysaccharide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytoplasmic sequestering of NF-kappaB IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NF-kappa-B inhibitor epsilon
    Names
    NFKB inhibitor epsilon

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cottoperca gobio Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fCotGob3.1

    Genomic

    1. NC_041378.1 Reference fCotGob3.1

      Range
      5548882..5558212 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029425619.1 → XP_029281479.1  NF-kappa-B inhibitor epsilon

      UniProtKB/TrEMBL
      A0A6J2P7X8
      Related
      ENSCGOP00000044706.1, ENSCGOT00000047744.1
      Conserved Domains (2) summary
      sd00045
      Location:211 → 242
      ANK; ANK repeat [structural motif]
      cl39094
      Location:144 → 328
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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