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    CPEB1 cytoplasmic polyadenylation element binding protein 1 [ Homo sapiens (human) ]

    Gene ID: 64506, updated on 12-Nov-2024

    Summary

    Official Symbol
    CPEB1provided by HGNC
    Official Full Name
    cytoplasmic polyadenylation element binding protein 1provided by HGNC
    Primary source
    HGNC:HGNC:21744
    See related
    Ensembl:ENSG00000214575 MIM:607342; AllianceGenome:HGNC:21744
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CPEB; CPEB-1; h-CPEB; CPE-BP1; hCPEB-1
    Summary
    This gene encodes a member of the cytoplasmic polyadenylation element binding protein family. This highly conserved protein binds to a specific RNA sequence, called the cytoplasmic polyadenylation element, found in the 3' untranslated region of some mRNAs. The encoded protein functions in both the cytoplasm and the nucleus. It is involved in the regulation of mRNA translation, as well as processing of the 3' untranslated region, and may play a role in cell proliferation and tumorigenesis. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2014]
    Expression
    Biased expression in testis (RPKM 19.2), brain (RPKM 6.3) and 8 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See CPEB1 in Genome Data Viewer
    Location:
    15q25.2
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (82543201..82648795, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (80407439..80513020, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (83211951..83317546, complement)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6748 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6749 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:82825221-82825722 Neighboring gene dynamin 1 pseudogene 38 Neighboring gene ribosomal protein S17 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6750 Neighboring gene CPEB1 antisense RNA 1 Neighboring gene Sharpr-MPRA regulatory region 5793 Neighboring gene adaptor related protein complex 3 subunit beta 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6751 Neighboring gene serine and arginine rich splicing factor 9 pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr15:83362511-83362661 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:83367432-83368224 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:83368225-83369015 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6752 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6753 Neighboring gene epididymal protein pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Potential readthrough

    Included gene: RPS17

    Clone Names

    • FLJ13203, MGC34136, MGC60106

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables mRNA 3'-UTR AU-rich region binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables mRNA 3'-UTR binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables mRNA regulatory element binding translation repressor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables mRNA regulatory element binding translation repressor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables ribosome binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables translation factor activity, RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in cellular response to amino acid stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in cellular response to hypoxia IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in cellular response to insulin stimulus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in mRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of cytoplasmic translation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of cytoplasmic translation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of mRNA 3'-end processing IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
     
    located_in dendrite IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in neuron projection IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleoplasm IDA
    Inferred from Direct Assay
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in postsynaptic density IEA
    Inferred from Electronic Annotation
    more info
     
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in synapse IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    cytoplasmic polyadenylation element-binding protein 1
    Names
    CPE-binding protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001079533.2NP_001073001.1  cytoplasmic polyadenylation element-binding protein 1 isoform 2

      See identical proteins and their annotated locations for NP_001073001.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2), also known as short, contains a distinct 5' UTR, lacks an in-frame portion of the 5' coding region, and uses an alternate in-frame splice site in the central coding region, compared to variant 1. The resulting isoform (2) has a shorter N-terminus and lacks a central 5 aa segment, compared to isoform 1. Variants 2 and 25 both encode the same isoform (2).
      Source sequence(s)
      AC010724, AF329403, AL832156
      Consensus CDS
      CCDS42072.2
      UniProtKB/Swiss-Prot
      B7Z6C6, Q86W46, Q8IV41, Q9BZB7, Q9BZB8, Q9H8V5
      Related
      ENSP00000483590.1, ENST00000618449.4
      Conserved Domains (4) summary
      pfam16366
      Location:429484
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234341
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:352435
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    2. NM_001079534.2NP_001073002.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      See identical proteins and their annotated locations for NP_001073002.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (4) contains a distinct 5' UTR and lacks an in-frame portion of the 5' coding region, compared to variant 1. The resulting isoform (3) has a shorter N-terminus, compared to isoform 1. Variants 3-5, 11-16, and 26-32 all encode the same isoform (3).
      Source sequence(s)
      AC010724, AF329403, AK023265, AL832156, DA705313
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Related
      ENSP00000483857.1, ENST00000611163.4
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    3. NM_001079535.2NP_001073003.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      See identical proteins and their annotated locations for NP_001073003.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) contains a distinct 5' UTR and lacks an in-frame portion of the 5' coding region, compared to variant 1. The resulting isoform (3) has a shorter N-terminus, compared to isoform 1. Variants 3-5, 11-16, and 26-32 all encode the same isoform (3).
      Source sequence(s)
      AC010724, AF329403, AL832156, BC035348, DA340952, DA705313
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Related
      ENSP00000477557.1, ENST00000617462.4
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    4. NM_001288819.2NP_001275748.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      See identical proteins and their annotated locations for NP_001275748.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (5) contains a distinct 5' UTR and lacks an in-frame portion of the 5' coding region, compared to variant 1. The resulting isoform (3) has a shorter N-terminus, compared to isoform 1. Variants 3-5, 11-16, and 26-32 all encode the same isoform (3).
      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Related
      ENSP00000484549.1, ENST00000620182.4
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    5. NM_001288820.2NP_001275749.1  cytoplasmic polyadenylation element-binding protein 1 isoform 4

      See identical proteins and their annotated locations for NP_001275749.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (6) contains a distinct 5' UTR and lacks an in-frame portion of the 5' coding region, compared to variant 1. The encoded isoform (4) has a shorter N-terminus, compared to isoform 1. Variants 6, 34, and 35 all encode the same isoform (4).
      Source sequence(s)
      AK301728, AL832156, BM715948, BX649159, HY191346
      UniProtKB/TrEMBL
      B4DWY2
      Conserved Domains (4) summary
      pfam16366
      Location:273328
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:181
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:83185
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:196279
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    6. NM_001365240.1NP_001352169.1  cytoplasmic polyadenylation element-binding protein 1 isoform 5

      Status: REVIEWED

      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS92050.1
      UniProtKB/TrEMBL
      A0A087WXG7, A0A087X171
      Conserved Domains (4) summary
      pfam16366
      Location:526581
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:31334
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:336438
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:449532
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    7. NM_001365241.1NP_001352170.1  cytoplasmic polyadenylation element-binding protein 1 isoform 5

      Status: REVIEWED

      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS92050.1
      UniProtKB/TrEMBL
      A0A087WXG7, A0A087X171
      Related
      ENSP00000481010.1, ENST00000614918.4
      Conserved Domains (4) summary
      pfam16366
      Location:526581
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:31334
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:336438
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:449532
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    8. NM_001365242.1NP_001352171.1  cytoplasmic polyadenylation element-binding protein 1 isoform 5

      Status: REVIEWED

      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS92050.1
      UniProtKB/TrEMBL
      A0A087WXG7, A0A087X171
      Related
      ENSP00000507835.1, ENST00000684509.1
      Conserved Domains (4) summary
      pfam16366
      Location:526581
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:31334
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:336438
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:449532
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    9. NM_001365243.1NP_001352172.1  cytoplasmic polyadenylation element-binding protein 1 isoform 6

      Status: REVIEWED

      Source sequence(s)
      AC105339, AC110291, AC245033
      UniProtKB/Swiss-Prot
      B7Z6C6, Q86W46, Q8IV41, Q9BZB7, Q9BZB8, Q9H8V5
      Related
      ENSP00000478598.1, ENST00000617958.4
      Conserved Domains (4) summary
      cd12723
      Location:309416
      RRM1_CPEB1; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:427512
      RRM2_CPEB1; RNA recognition motif 2 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      pfam16366
      Location:504559
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1307
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
    10. NM_001365244.1NP_001352173.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      Status: REVIEWED

      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    11. NM_001365245.1NP_001352174.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      Status: REVIEWED

      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    12. NM_001365246.1NP_001352175.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      Status: REVIEWED

      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    13. NM_001365247.1NP_001352176.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      Status: REVIEWED

      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    14. NM_001365248.1NP_001352177.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      Status: REVIEWED

      Source sequence(s)
      AC245033
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    15. NM_001365249.1NP_001352178.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      Status: REVIEWED

      Source sequence(s)
      AC245033
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    16. NM_001365250.1NP_001352179.1  cytoplasmic polyadenylation element-binding protein 1 isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC245033
      Consensus CDS
      CCDS42072.2
      UniProtKB/Swiss-Prot
      B7Z6C6, Q86W46, Q8IV41, Q9BZB7, Q9BZB8, Q9H8V5
      Conserved Domains (4) summary
      pfam16366
      Location:429484
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234341
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:352435
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    17. NM_001387061.1NP_001373990.1  cytoplasmic polyadenylation element-binding protein 1 isoform 7

      Status: REVIEWED

      Description
      Transcript Variant: This variant (18) encodes the longest isoform (7).
      Source sequence(s)
      AC105339, AC110291, AC245033
      UniProtKB/Swiss-Prot
      B7Z6C6, Q86W46, Q8IV41, Q9BZB7, Q9BZB8, Q9H8V5
      Conserved Domains (4) summary
      pfam16366
      Location:531586
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:31334
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:336443
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:454537
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    18. NM_001387062.1NP_001373991.1  cytoplasmic polyadenylation element-binding protein 1 isoform 5

      Status: REVIEWED

      Description
      Transcript Variant: This variant (19), as well as variants 7-9 and 20-24, encodes isoform 5.
      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS92050.1
      UniProtKB/TrEMBL
      A0A087WXG7, A0A087X171
      Conserved Domains (4) summary
      pfam16366
      Location:526581
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:31334
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:336438
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:449532
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    19. NM_001387063.1NP_001373992.1  cytoplasmic polyadenylation element-binding protein 1 isoform 5

      Status: REVIEWED

      Description
      Transcript Variant: This variant (20), as well as variants 7-9, 19, and 21-24, encodes isoform 5.
      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS92050.1
      UniProtKB/TrEMBL
      A0A087WXG7, A0A087X171
      Conserved Domains (4) summary
      pfam16366
      Location:526581
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:31334
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:336438
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:449532
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    20. NM_001387064.1NP_001373993.1  cytoplasmic polyadenylation element-binding protein 1 isoform 5

      Status: REVIEWED

      Description
      Transcript Variant: This variant (21), as well as variants 7-9, 19, 20, and 22-24, encodes isoform 5.
      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS92050.1
      UniProtKB/TrEMBL
      A0A087WXG7, A0A087X171
      Conserved Domains (4) summary
      pfam16366
      Location:526581
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:31334
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:336438
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:449532
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    21. NM_001387065.1NP_001373994.1  cytoplasmic polyadenylation element-binding protein 1 isoform 5

      Status: REVIEWED

      Description
      Transcript Variant: This variant (22), as well as variants 7-9, 19-21, 23, and 24, encodes isoform 5.
      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS92050.1
      UniProtKB/TrEMBL
      A0A087WXG7, A0A087X171
      Conserved Domains (4) summary
      pfam16366
      Location:526581
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:31334
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:336438
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:449532
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    22. NM_001387066.1NP_001373995.1  cytoplasmic polyadenylation element-binding protein 1 isoform 5

      Status: REVIEWED

      Description
      Transcript Variant: This variant (23), as well as variants 7-9, 19-22, and 24, encodes isoform 5.
      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS92050.1
      UniProtKB/TrEMBL
      A0A087WXG7, A0A087X171
      Conserved Domains (4) summary
      pfam16366
      Location:526581
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:31334
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:336438
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:449532
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    23. NM_001387067.1NP_001373996.1  cytoplasmic polyadenylation element-binding protein 1 isoform 5

      Status: REVIEWED

      Description
      Transcript Variant: This variant (24), as well as variants 7-9 and 19-23, encodes isoform 5.
      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS92050.1
      UniProtKB/TrEMBL
      A0A087WXG7, A0A087X171
      Conserved Domains (4) summary
      pfam16366
      Location:526581
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:31334
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:336438
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:449532
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    24. NM_001387068.1NP_001373997.1  cytoplasmic polyadenylation element-binding protein 1 isoform 2

      Status: REVIEWED

      Description
      Transcript Variant: This variant (25), as well as variant 2, encodes isoform (2).
      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS42072.2
      UniProtKB/Swiss-Prot
      B7Z6C6, Q86W46, Q8IV41, Q9BZB7, Q9BZB8, Q9H8V5
      Conserved Domains (4) summary
      pfam16366
      Location:429484
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234341
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:352435
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    25. NM_001387069.1NP_001373998.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      Status: REVIEWED

      Description
      Transcript Variant: This variant (26), as well as variants 3-5, 11-16, and 27-32, encodes isoform 3.
      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    26. NM_001387070.1NP_001373999.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      Status: REVIEWED

      Description
      Transcript Variant: This variant (27), as well as variants 3-5, 11-16, 26, and 28-32, encodes isoform 3.
      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    27. NM_001387071.1NP_001374000.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      Status: REVIEWED

      Description
      Transcript Variant: This variant (28), as well as variants 3-5, 11-16, 26, 27, and 29-32, encodes isoform 3.
      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    28. NM_001387072.1NP_001374001.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      Status: REVIEWED

      Description
      Transcript Variant: This variant (29), as well as variants 3-5, 11-16, 26-28, and 30-32, encodes isoform 3.
      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    29. NM_001387073.1NP_001374002.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      Status: REVIEWED

      Description
      Transcript Variant: This variant (30), as well as variants 3-5, 11-16, 26-29, 31 and 32, encodes isoform 3.
      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    30. NM_001387074.1NP_001374003.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      Status: REVIEWED

      Description
      Transcript Variant: This variant (31), as well as variants 3-5, 11-16, 26-30, and 32, encodes isoform 3.
      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    31. NM_001387075.1NP_001374004.1  cytoplasmic polyadenylation element-binding protein 1 isoform 3

      Status: REVIEWED

      Description
      Transcript Variant: This variant (32), as well as variants 3-5, 11-16, and 26-31, encodes isoform 3.
      Source sequence(s)
      AC105339, AC110291, AC245033
      Consensus CDS
      CCDS45330.2
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Conserved Domains (4) summary
      pfam16366
      Location:424479
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234336
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:347430
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    32. NM_001387076.1NP_001374005.1  cytoplasmic polyadenylation element-binding protein 1 isoform 8

      Status: REVIEWED

      Source sequence(s)
      AC105339, AC110291, AC245033
      UniProtKB/TrEMBL
      A0A0J9YXP0
      Conserved Domains (4) summary
      pfam16366
      Location:412467
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1232
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:234324
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:335418
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    33. NM_001387077.1NP_001374006.1  cytoplasmic polyadenylation element-binding protein 1 isoform 4

      Status: REVIEWED

      Description
      Transcript Variant: This variant (34), as well as variants 6 and 35, encodes isoform 4.
      Source sequence(s)
      AC245033
      UniProtKB/TrEMBL
      B4DWY2
      Conserved Domains (4) summary
      pfam16366
      Location:273328
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:181
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:83185
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:196279
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    34. NM_001387078.1NP_001374007.1  cytoplasmic polyadenylation element-binding protein 1 isoform 4

      Status: REVIEWED

      Description
      Transcript Variant: This variant (35), as well as variants 6 and 34, encodes isoform 4.
      Source sequence(s)
      AC245033
      UniProtKB/TrEMBL
      B4DWY2
      Conserved Domains (4) summary
      pfam16366
      Location:273328
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:181
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus
      cd12723
      Location:83185
      RRM1_CPEB1; RNA recognition motif 1 (RRM1) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:196279
      RRM2_CPEB1; RNA recognition motif 2 (RRM2) found in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
    35. NM_030594.5NP_085097.3  cytoplasmic polyadenylation element-binding protein 1 isoform 1

      See identical proteins and their annotated locations for NP_085097.3

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) encodes isoform 1.
      Source sequence(s)
      AC105339, AL832156, BC050629, BM715948, BX649159, HY007452, HY191346
      Consensus CDS
      CCDS45329.2
      UniProtKB/TrEMBL
      A0A087X171
      Related
      ENSP00000477715.1, ENST00000615198.4
      Conserved Domains (4) summary
      cd12723
      Location:309411
      RRM1_CPEB1; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      cd12725
      Location:422507
      RRM2_CPEB1; RNA recognition motif 2 in cytoplasmic polyadenylation element-binding protein 1 (CPEB-1) and similar proteins
      pfam16366
      Location:499554
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
      pfam16368
      Location:1307
      CEBP1_N; Cytoplasmic polyadenylation element-binding protein 1 N-terminus

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      82543201..82648795 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187606.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      332306..430793 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      80407439..80513020 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)