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    CJI96_0000343 hypothetical_protein [ [Candida] auris ]

    Gene ID: 40027692, updated on 1-Aug-2024

    Summary

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    Gene symbol
    CJI96_0000343
    Gene description
    hypothetical_protein
    Locus tag
    CJI96_0000343
    See related
    FungiDB:CJI96_0000343; VEuPathDB:CJI96_0000343
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    [Candida] auris (strain: B11220, nat-host: Homo sapiens, type-material: culture from type material of Candida auris)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Metschnikowiaceae; Metschnikowiaceae incertae sedis; Candida/Metschnikowiaceae
    Old locus tag
    CJI97_002546
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    Genomic context

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    See CJI96_0000343 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_072812.1 (727140..727791)

    Chromosome 1 - NC_072812.1Genomic Context describing neighboring genes Neighboring gene glycolate_oxidase,_subunit_GlcD Neighboring gene biotin_synthase,_mitochondrial Neighboring gene tRNA-Asn Neighboring gene 5-aminolevulinate_synthase,_mitochondrial

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_072812.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic insights into multidrug-resistance, mating and virulence in Candida auris and related emerging species. Muñoz JF, et al. Nat Commun, 2018 Dec 17. PMID 30559369, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical_protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_072812.1 Reference assembly

      Range
      727140..727791
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029034568.1 → XP_028889810.1  hypothetical_protein [[Candida] auris]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2H0ZQD9, A0A8F3AGL5
      Conserved Domains (1) summary
      pfam01776
      Location:15 → 111
      Ribosomal_L22e; Ribosomal L22e protein family
    Nucleotide Protein
    Heading Accession and Version

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